-
Notifications
You must be signed in to change notification settings - Fork 0
/
Copy pathtest_genes.bed
200 lines (200 loc) · 10.2 KB
/
test_genes.bed
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
chr1 11869 14412 ENSG00000223972.4_DDX11L1 1 +
chr1 14363 29806 ENSG00000227232.4_WASH7P 1 -
chr1 29554 31109 ENSG00000243485.2_MIR1302-11 1 +
chr1 34554 36081 ENSG00000237613.2_FAM138A 1 -
chr1 52473 54936 ENSG00000268020.2_OR4G4P 1 +
chr1 62948 63887 ENSG00000240361.1_OR4G11P 1 +
chr1 69091 70008 ENSG00000186092.4_OR4F5 1 +
chr1 89295 133566 ENSG00000238009.2_RP11-34P13.7 1 -
chr1 89551 91105 ENSG00000239945.1_RP11-34P13.8 1 -
chr1 131025 134836 ENSG00000233750.3_CICP27 1 +
chr1 134901 139379 ENSG00000237683.5_AL627309.1 1 -
chr1 135141 135895 ENSG00000268903.1_RP11-34P13.15 1 -
chr1 137682 137965 ENSG00000269981.1_RP11-34P13.16 1 -
chr1 139790 140339 ENSG00000239906.1_RP11-34P13.14 1 -
chr1 141474 173862 ENSG00000241860.2_RP11-34P13.13 1 -
chr1 157784 157887 ENSG00000222623.1_RNU6-1100P 1 -
chr1 160446 161525 ENSG00000241599.1_RP11-34P13.9 1 +
chr1 227615 267253 ENSG00000228463.4_AP006222.2 1 -
chr1 228292 228775 ENSG00000241670.2_AP006222.1 1 -
chr1 317720 453948 ENSG00000237094.7_RP4-669L17.10 1 +
chr1 326096 328112 ENSG00000250575.1_RP4-669L17.8 1 +
chr1 329431 332236 ENSG00000233653.3_CICP7 1 -
chr1 334126 334305 ENSG00000224813.2_RP4-669L17.4 1 +
chr1 367640 368634 ENSG00000235249.1_OR4F29 1 +
chr1 379105 379467 ENSG00000269732.1_WBP1LP7 1 -
chr1 450820 450910 ENSG00000256186.1_AL732372.1 1 -
chr1 453633 460480 ENSG00000236601.1_RP4-669L17.2 1 -
chr1 459656 461954 ENSG00000236743.1_RP5-857K21.15 1 +
chr1 470971 471355 ENSG00000236679.2_RP4-669L17.1 1 +
chr1 521369 523833 ENSG00000231709.1_RP5-857K21.1 1 -
chr1 523009 530148 ENSG00000235146.2_RP5-857K21.2 1 +
chr1 529833 532878 ENSG00000239664.2_RP5-857K21.3 1 -
chr1 536816 659930 ENSG00000230021.3_RP5-857K21.4 1 -
chr1 562757 564390 ENSG00000223659.1_RP5-857K21.5 1 -
chr1 564442 564813 ENSG00000225972.1_MTND1P23 1 +
chr1 565020 566063 ENSG00000225630.1_MTND2P28 1 +
chr1 566454 567996 ENSG00000237973.1_hsa-mir-6723 1 +
chr1 568137 568818 ENSG00000229344.1_RP5-857K21.7 1 +
chr1 568915 569121 ENSG00000240409.1_MTATP8P1 1 +
chr1 569076 569756 ENSG00000248527.1_MTATP6P1 1 +
chr1 569756 570302 ENSG00000198744.5_RP5-857K21.11 1 +
chr1 610222 610645 ENSG00000268663.1_WBP1LP6 1 +
chr1 621059 622053 ENSG00000185097.2_OR4F16 1 -
chr1 657472 660283 ENSG00000229376.3_CICP3 1 +
chr1 661611 663527 ENSG00000224956.5_RP11-206L10.1 1 -
chr1 677193 685396 ENSG00000235373.1_RP11-206L10.3 1 -
chr1 693613 693716 ENSG00000223181.1_RNU6-1199P 1 -
chr1 694412 700305 ENSG00000240618.1_RP11-206L10.5 1 -
chr1 696291 697369 ENSG00000229905.1_RP11-206L10.4 1 +
chr1 700237 714006 ENSG00000228327.2_RP11-206L10.2 1 -
chr1 714150 745440 ENSG00000237491.4_RP11-206L10.9 1 +
chr1 736259 745541 ENSG00000230092.3_RP11-206L10.8 1 -
chr1 738532 739137 ENSG00000269831.1_AL669831.1 1 -
chr1 745489 753092 ENSG00000240453.1_RP11-206L10.10 1 -
chr1 752751 755214 ENSG00000177757.1_FAM87B 1 +
chr1 761586 762902 ENSG00000225880.4_LINC00115 1 -
chr1 762988 794826 ENSG00000228794.4_RP11-206L10.11 1 +
chr1 803451 812283 ENSG00000230368.2_FAM41C 1 -
chr1 808672 809729 ENSG00000234711.1_TUBB8P11 1 +
chr1 818043 819983 ENSG00000269308.1_AL645608.2 1 +
chr1 840214 851356 ENSG00000272438.1_RP11-54O7.16 1 +
chr1 846815 850328 ENSG00000230699.2_RP11-54O7.1 1 +
chr1 849551 850351 ENSG00000241180.1_RP11-54O7.2 1 +
chr1 852245 856396 ENSG00000223764.2_RP11-54O7.3 1 -
chr1 860260 879955 ENSG00000187634.6_SAMD11 1 +
chr1 861264 866445 ENSG00000268179.1_AL645608.1 1 -
chr1 879584 894689 ENSG00000188976.6_NOC2L 1 -
chr1 895967 901095 ENSG00000187961.9_KLHL17 1 +
chr1 901877 911245 ENSG00000187583.6_PLEKHN1 1 +
chr1 910579 917497 ENSG00000187642.5_C1orf170 1 -
chr1 931346 933431 ENSG00000272512.1_RP11-54O7.17 1 -
chr1 934342 935552 ENSG00000188290.6_HES4 1 -
chr1 943456 943609 ENSG00000231702.2_RP11-54O7.10 1 -
chr1 947377 948573 ENSG00000224969.1_RP11-54O7.11 1 -
chr1 948803 949920 ENSG00000187608.5_ISG15 1 +
chr1 955503 991496 ENSG00000188157.9_AGRN 1 +
chr1 990413 991496 ENSG00000242590.1_RP11-54O7.14 1 +
chr1 995114 1004735 ENSG00000217801.5_RP11-465B22.3 1 +
chr1 997588 998668 ENSG00000273443.1_RP11-54O7.18 1 -
chr1 1006346 1009687 ENSG00000237330.2_RNF223 1 -
chr1 1017198 1051741 ENSG00000131591.13_C1orf159 1 -
chr1 1072397 1079436 ENSG00000223823.1_RP11-465B22.5 1 +
chr1 1102484 1102578 ENSG00000207730.1_MIR200B 1 +
chr1 1103243 1103332 ENSG00000207607.1_MIR200A 1 +
chr1 1104385 1104467 ENSG00000198976.1_MIR429 1 +
chr1 1104737 1105723 ENSG00000272141.1_RP11-465B22.8 1 +
chr1 1108436 1114935 ENSG00000205231.1_TTLL10-AS1 1 -
chr1 1109264 1133315 ENSG00000162571.9_TTLL10 1 +
chr1 1138888 1142071 ENSG00000186891.9_TNFRSF18 1 -
chr1 1146706 1149518 ENSG00000186827.6_TNFRSF4 1 -
chr1 1152288 1167411 ENSG00000078808.12_SDF4 1 -
chr1 1167629 1170421 ENSG00000176022.3_B3GALT6 1 +
chr1 1177826 1182102 ENSG00000184163.3_FAM132A 1 -
chr1 1185157 1186714 ENSG00000260179.1_RP5-902P8.12 1 -
chr1 1189289 1209265 ENSG00000160087.16_UBE2J2 1 -
chr1 1210603 1215800 ENSG00000230415.1_RP5-902P8.10 1 +
chr1 1215816 1227409 ENSG00000162572.15_SCNN1D 1 +
chr1 1227756 1244989 ENSG00000131584.14_ACAP3 1 -
chr1 1243947 1247057 ENSG00000169972.7_PUSL1 1 +
chr1 1246965 1260071 ENSG00000127054.14_CPSF3L 1 -
chr1 1252961 1254069 ENSG00000240731.1_RP5-890O3.9 1 -
chr1 1260136 1264277 ENSG00000224051.2_GLTPD1 1 +
chr1 1266694 1270686 ENSG00000169962.4_TAS1R3 1 +
chr1 1270656 1284730 ENSG00000107404.13_DVL1 1 -
chr1 1288069 1297157 ENSG00000162576.12_MXRA8 1 -
chr1 1309110 1310875 ENSG00000175756.9_AURKAIP1 1 -
chr1 1314046 1314412 ENSG00000223663.2_RP5-890O3.3 1 +
chr1 1321091 1334708 ENSG00000221978.7_CCNL2 1 -
chr1 1334902 1337426 ENSG00000224870.3_RP4-758J18.2 1 +
chr1 1337288 1342693 ENSG00000242485.1_MRPL20 1 -
chr1 1340841 1341132 ENSG00000264293.1_RN7SL657P 1 -
chr1 1344476 1345998 ENSG00000272455.1_RP4-758J18.13 1 +
chr1 1353800 1357149 ENSG00000235098.4_ANKRD65 1 -
chr1 1355625 1358071 ENSG00000225905.1_RP4-758J18.7 1 +
chr1 1361508 1363167 ENSG00000205116.3_TMEM88B 1 +
chr1 1365919 1369953 ENSG00000225285.1_RP4-758J18.10 1 -
chr1 1370241 1378262 ENSG00000179403.10_VWA1 1 +
chr1 1385069 1405538 ENSG00000215915.5_ATAD3C 1 +
chr1 1407143 1433228 ENSG00000160072.15_ATAD3B 1 +
chr1 1447531 1470067 ENSG00000197785.9_ATAD3A 1 +
chr1 1470554 1475833 ENSG00000205090.4_TMEM240 1 -
chr1 1477053 1510249 ENSG00000160075.10_SSU72 1 -
chr1 1497726 1499904 ENSG00000215791.2_AL645728.2 1 -
chr1 1510355 1511373 ENSG00000215014.3_AL645728.1 1 +
chr1 1515136 1515379 ENSG00000236684.1_AL645728.3 1 +
chr1 1533392 1535476 ENSG00000228594.1_C1orf233 1 -
chr1 1549138 1551175 ENSG00000272106.1_RP11-345P4.9 1 -
chr1 1550795 1565990 ENSG00000197530.8_MIB2 1 +
chr1 1567474 1570639 ENSG00000189409.8_MMP23B 1 +
chr1 1570603 1590473 ENSG00000248333.3_CDK11B 1 -
chr1 1590786 1594063 ENSG00000272004.1_RP11-345P4.10 1 +
chr1 1592939 1624167 ENSG00000189339.7_SLC35E2B 1 -
chr1 1603429 1604850 ENSG00000269737.1_RP11-345P4.7 1 +
chr1 1604714 1605836 ENSG00000269227.1_RP11-345P4.6 1 +
chr1 1631369 1633249 ENSG00000215914.3_MMP23A 1 +
chr1 1634169 1655766 ENSG00000008128.18_CDK11A 1 -
chr1 1634175 1669127 ENSG00000268575.1_RP1-283E3.8 1 -
chr1 1655951 1668690 ENSG00000227775.3_RP1-283E3.4 1 +
chr1 1656277 1677431 ENSG00000215790.2_SLC35E2 1 -
chr1 1682671 1711896 ENSG00000008130.11_NADK 1 -
chr1 1716729 1822495 ENSG00000078369.13_GNB1 1 -
chr1 1822910 1824097 ENSG00000231050.1_RP1-140A9.1 1 +
chr1 1846266 1848735 ENSG00000169885.5_CALML6 1 +
chr1 1849029 1850712 ENSG00000178821.8_TMEM52 1 -
chr1 1853396 1935276 ENSG00000142609.13_C1orf222 1 -
chr1 1944652 1946969 ENSG00000233542.1_RP11-547D24.1 1 -
chr1 1950780 1962192 ENSG00000187730.6_GABRD 1 +
chr1 1980642 1981509 ENSG00000226969.1_RP11-547D24.3 1 -
chr1 1981909 2116834 ENSG00000067606.11_PRKCZ 1 +
chr1 2072523 2076718 ENSG00000271806.1_RP5-892K4.1 1 -
chr1 2113233 2115828 ENSG00000182873.4_RP11-181G12.2 1 -
chr1 2115903 2144159 ENSG00000162585.12_C1orf86 1 -
chr1 2121237 2123179 ENSG00000269554.1_AL590822.2 1 +
chr1 2143360 2145620 ENSG00000203301.2_AL590822.1 1 -
chr1 2143610 2144013 ENSG00000243558.1_RP11-181G12.5 1 -
chr1 2143962 2152177 ENSG00000234396.3_RP11-181G12.4 1 +
chr1 2160134 2241558 ENSG00000157933.9_SKI 1 +
chr1 2252692 2323146 ENSG00000116151.9_MORN1 1 -
chr1 2257640 2258132 ENSG00000272161.1_RP4-713A8.1 1 -
chr1 2258581 2259042 ENSG00000269753.1_AL589739.1 1 +
chr1 2281853 2284259 ENSG00000269896.1_RP4-740C4.6 1 -
chr1 2283083 2283296 ENSG00000238240.2_RP4-740C4.5 1 -
chr1 2294500 2295067 ENSG00000272420.1_RP4-740C4.7 1 -
chr1 2306292 2306792 ENSG00000271921.1_RP4-740C4.9 1 -
chr1 2309056 2309799 ENSG00000271847.1_RP4-740C4.8 1 -
chr1 2316811 2319922 ENSG00000178642.5_AL513477.1 1 +
chr1 2323267 2336883 ENSG00000157916.14_RER1 1 +
chr1 2336236 2345236 ENSG00000157911.5_PEX10 1 -
chr1 2357419 2436969 ENSG00000149527.13_PLCH2 1 +
chr1 2423739 2424697 ENSG00000224387.1_RP3-395M20.2 1 -
chr1 2424876 2425918 ENSG00000229393.1_RP3-395M20.3 1 -
chr1 2439972 2458039 ENSG00000157881.9_PANK4 1 -
chr1 2460184 2461684 ENSG00000197921.5_HES5 1 -
chr1 2477904 2478899 ENSG00000272449.1_RP3-395M20.12 1 +
chr1 2481359 2488470 ENSG00000238164.2_RP3-395M20.8 1 -
chr1 2487078 2496821 ENSG00000157873.13_TNFRSF14 1 +
chr1 2497849 2501327 ENSG00000225931.3_RP3-395M20.7 1 +
chr1 2512999 2515972 ENSG00000228037.1_RP3-395M20.9 1 +
chr1 2517930 2522908 ENSG00000157870.10_FAM213B 1 +
chr1 2522078 2564481 ENSG00000142606.11_MMEL1 1 -
chr1 2564007 2568059 ENSG00000237058.1_RP13-436F16.1 1 +
chr1 2567415 2718286 ENSG00000215912.7_TTC34 1 -
chr1 2728415 2729257 ENSG00000233234.1_RP11-740P5.2 1 -
chr1 2730997 2731563 ENSG00000231630.1_RP11-740P5.3 1 -
chr1 2938046 2939465 ENSG00000169717.5_ACTRT2 1 +
chr1 2976179 2985001 ENSG00000177133.6_LINC00982 1 -
chr1 2978523 2978959 ENSG00000256761.1_AL008733.1 1 -
chr1 2985732 3355185 ENSG00000142611.12_PRDM16 1 +
chr1 3049491 3050273 ENSG00000226286.1_RP1-163G9.2 1 -
chr1 3223200 3226660 ENSG00000272235.1_RP11-22L13.1 1 -
chr1 3370990 3397677 ENSG00000130762.10_ARHGEF16 1 +
chr1 3403810 3404191 ENSG00000272088.1_RP11-168F9.2 1 +
chr1 3406484 3528059 ENSG00000162591.11_MEGF6 1 -
chr1 3477259 3477354 ENSG00000207776.1_MIR551A 1 -
chr1 3539754 3541307 ENSG00000238260.1_RP11-46F15.2 1 -
chr1 3541566 3546691 ENSG00000158109.10_TPRG1L 1 +
chr1 3547331 3569325 ENSG00000116213.11_WRAP73 1 -
chr1 3569084 3652765 ENSG00000078900.10_TP73 1 +
chr1 3575502 3585336 ENSG00000227589.1_RP5-1092A11.5 1 -
chr1 3628764 3630862 ENSG00000235131.1_RP5-1092A11.2 1 -