TAGS


doc.c,423
void doc_sample_levels(8,66
void compute_log_p_level(65,1506
void doc_update_level(102,2469
void read_corpus(113,2599
corpus* corpus_new(181,4319
void free_corpus(193,4555
void free_doc(204,4720
void write_corpus_assignment(219,4995
void write_corpus_levels(237,5487
double gem_score(260,5987
void corpus_mh_update_gem(324,8287
void corpus_mh_update_gem_mean(362,9385
void corpus_mh_update_gem_scale(394,10220

doc.h,133
#define DOCH2,13
#define OFFSET 10,136
#define MH_GEM_STDEV 11,153
#define MH_GEM_MEAN_STDEV 12,179
#define MH_GEM_STDEV 13,210

gibbs.c,400
void write_gibbs_state(5,49
void write_gibbs_output(33,971
void compute_gibbs_score(86,2648
void iterate_gibbs_state(101,3087
void init_gibbs_state(164,4800
gibbs_state* init_gibbs_state_w_rep(191,5636
gibbs_state * new_gibbs_state(231,6828
void set_up_directories(272,8294
gibbs_state * new_heldout_gibbs_state(322,9943
double mean_heldout_score(342,10412
void free_gibbs_state(376,11369

gibbs.h,253
#define GIBBSH2,15
#define WRITE_MODE_CORPUS 11,129
#define DEFAULT_OUTPUT_LAG 12,157
#define DEFAULT_HYPER_LAG 13,189
#define DEFAULT_SHUFFLE_LAG 14,217
#define DEFAULT_LEVEL_LAG 15,249
#define DEFAULT_SAMPLE_GAM 16,278
#define NINITREP 17,307

hyperparameter.c,39
double gibbs_sample_DP_scaling(21,390

hyperparameter.h,29
#define HYPERPARAMETERH2,24

main.c,144
#define MAX_ITER 11,176
#define TEST_LAG 12,199
#define NRESTARTS 13,220
void main_gibbs(17,281
void main_heldout(39,760
int main(73,1775

topic.c,1016
void topic_update_word(8,72
void topic_update_doc_cnt(29,511
double eta_score(42,702
void tree_mh_update_eta(70,1354
void tree_update_from_doc(113,2362
void tree_remove_doc_from_path(139,2895
void tree_add_doc_to_path(146,3053
void tree_sample_doc_path(171,3479
double log_gamma_ratio(208,4294
double log_gamma_ratio_new(246,5242
void populate_prob_dfs(278,5881
void tree_prune(344,7749
void delete_node(363,7995
topic* tree_fill(398,8577
topic* topic_add_child(417,8790
topic* topic_new(434,9158
topic* tree_sample_path(473,10302
topic* tree_sample_dfs(491,10657
double gamma_score(524,11335
void dfs_sample_scaling(552,11981
tree* tree_new(576,12496
void write_tree_topics_dfs(603,13002
int ntopics_in_tree(635,13729
int ntopics_in_tree_dfs(640,13808
void free_tree(657,14056
void free_tree_dfs(663,14130
tree * copy_tree(680,14415
void copy_tree_dfs(694,14801
void copy_topic(707,15066
void write_tree_levels(728,15609
void write_tree_level_dfs(736,15745
void write_tree(754,16100

topic.h,78
#define TOPICH2,15
#define MH_ETA_STDEV 10,147
#define MH_GAM_STDEV 11,174

typedefs.h,320
#define TYPEDEFS2,17
#define MH_REPS 4,35
#define TRUE 5,55
#define FALSE 6,70
typedef struct topic11,135
} topic;30,1011
typedef struct tree33,1022
} tree;42,1488
typedef struct doc45,1498
} doc;57,1899
typedef struct corpus60,1908
} corpus;67,2020
typedef struct gibbs_state69,2031
} gibbs_state;96,2539

unused-code.C,601
    gsl_permutation* perm 5,75
    int temp1[temp1
6,132
    int temp2[temp2
7,162
    for (i = 0; i < d->word->size;size
8,192
        temp1[temp1
10,238
        temp2[temp2
11,286
    for (i = 0; i < d->word->size;size
13,342
        d->word->val[val
15,388
        d->levels->val[val
16,424
void tree_mh_update_gam(25,575
double gamma_score_PY(69,1661
void initialize_corpus_old(140,3362
void reinitialize_corpus(179,4231
void doc_initialize_levels(202,4799
void remove_state(222,5381
void tree_sample_all(241,5833
double alpha_score(261,6185
void corpus_mh_update_alpha(288,6704

utils.c,854
gsl_rng* RANDNUMGEN 2,19
void init_random_number_generator(9,105
int directory_exist(29,445
void make_directory(55,712
int sample_from_log(66,850
int_vector* new_int_vector(94,1332
void delete_int_vector(107,1579
void ivappend(119,1705
void vct_fscanf(132,1905
int_vector* iv_copy(146,2172
void iv_permute(165,2478
void iv_permute_from_perm(173,2640
gsl_permutation* rpermutation(191,2946
double runif(205,3189
double rgauss(211,3251
double rgamma(219,3406
double log_dgamma(226,3538
double rbeta(237,3788
int rbernoulli(244,3901
double sum(255,4019
void print_vector(271,4190
void write_vect(286,4391
gsl_vector* read_vect(298,4624
int read_int(324,5048
void write_int(334,5246
void write_double(341,5354
double read_double(347,5472
FILE* LOG;356,5640
static time_t TVAL;357,5651
void outlog(358,5671
void resize(382,6026

utils.h,354
#define UTILSH2,15
time_t TIME;17,312
char line1[line1
18,325
typedef struct int_vector22,372
} int_vector;26,428
static inline int ivget(33,562
static inline void ivset(36,633
static inline void vset(39,712
static inline double vget(42,799
static inline void vinc(45,889
static inline double log_sum(48,979
static inline double lgam(56,1164

ncrp-gibbs.c,0