diff --git a/dev/.buildinfo b/dev/.buildinfo index 4787c47..da42637 100644 --- a/dev/.buildinfo +++ b/dev/.buildinfo @@ -1,4 +1,4 @@ # Sphinx build info version 1 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. -config: 50f115c9560a6ad0e98ae52132b7b316 +config: 06a9b41a3fa209400455f1f47e8b03e4 tags: 645f666f9bcd5a90fca523b33c5a78b7 diff --git a/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip b/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip index 524b539..c24b918 100644 Binary files a/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip and b/dev/_downloads/07fcc19ba03226cd3d83d4e40ec44385/auto_examples_python.zip differ diff --git a/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip b/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip index aa7163e..7051bae 100644 Binary files a/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip and b/dev/_downloads/6f1e7a639e0699d6164445b55e6c116d/auto_examples_jupyter.zip differ diff --git a/dev/_downloads/85c2c90b959d98328ef38b4615114365/plot_autoreject_workflow.py b/dev/_downloads/85c2c90b959d98328ef38b4615114365/plot_autoreject_workflow.py index 277e865..56a9462 100644 --- a/dev/_downloads/85c2c90b959d98328ef38b4615114365/plot_autoreject_workflow.py +++ b/dev/_downloads/85c2c90b959d98328ef38b4615114365/plot_autoreject_workflow.py @@ -10,7 +10,7 @@ other preprocessing steps to use in combination. **tldr**: We recommend that you first highpass filter the data, -then run autoreject (local) and supply the bad epochs detected by it +then run autoreject (local) and supply the artifact-free epochs to the ICA algorithm for a robust fit, and finally run autoreject (local) again. """ diff --git a/dev/_downloads/88aa0ebf52f0f32e2f92cc901577e2ba/plot_autoreject_workflow.ipynb b/dev/_downloads/88aa0ebf52f0f32e2f92cc901577e2ba/plot_autoreject_workflow.ipynb index 1cf2690..db48370 100644 --- a/dev/_downloads/88aa0ebf52f0f32e2f92cc901577e2ba/plot_autoreject_workflow.ipynb +++ b/dev/_downloads/88aa0ebf52f0f32e2f92cc901577e2ba/plot_autoreject_workflow.ipynb @@ -4,7 +4,7 @@ "cell_type": "markdown", "metadata": {}, "source": [ - "\n\n# Preprocessing workflow with ``autoreject`` and ICA\nThis example demonstrates how to visualize data when preprocessing\nwith :mod:`autoreject` and discusses decisions about when and which\nother preprocessing steps to use in combination.\n\n**tldr**: We recommend that you first highpass filter the data,\nthen run autoreject (local) and supply the bad epochs detected by it\nto the ICA algorithm for a robust fit, and finally run\nautoreject (local) again.\n" + "\n\n# Preprocessing workflow with ``autoreject`` and ICA\nThis example demonstrates how to visualize data when preprocessing\nwith :mod:`autoreject` and discusses decisions about when and which\nother preprocessing steps to use in combination.\n\n**tldr**: We recommend that you first highpass filter the data,\nthen run autoreject (local) and supply the artifact-free epochs\nto the ICA algorithm for a robust fit, and finally run\nautoreject (local) again.\n" ] }, { diff --git a/dev/_modules/autoreject/autoreject.html b/dev/_modules/autoreject/autoreject.html index ec44b32..a04d46d 100644 --- a/dev/_modules/autoreject/autoreject.html +++ b/dev/_modules/autoreject/autoreject.html @@ -1965,7 +1965,7 @@
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/_modules/autoreject/ransac.html b/dev/_modules/autoreject/ransac.html
index 6e16a84..95cea41 100644
--- a/dev/_modules/autoreject/ransac.html
+++ b/dev/_modules/autoreject/ransac.html
@@ -716,7 +716,7 @@ Source code for autoreject.ransac
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/_modules/autoreject/utils.html b/dev/_modules/autoreject/utils.html
index cadc439..af361c3 100644
--- a/dev/_modules/autoreject/utils.html
+++ b/dev/_modules/autoreject/utils.html
@@ -947,7 +947,7 @@ Source code for autoreject.utils
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/_modules/index.html b/dev/_modules/index.html
index 0d990c0..e1f387f 100644
--- a/dev/_modules/index.html
+++ b/dev/_modules/index.html
@@ -461,7 +461,7 @@ All modules for which code is available
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/api.html b/dev/api.html
index 666744b..8e4e4fe 100644
--- a/dev/api.html
+++ b/dev/api.html
@@ -575,7 +575,7 @@ Utilities
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/index.html b/dev/auto_examples/index.html
index 4fc2fa2..5937fdd 100644
--- a/dev/auto_examples/index.html
+++ b/dev/auto_examples/index.html
@@ -532,7 +532,7 @@
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/plot_auto_repair.html b/dev/auto_examples/plot_auto_repair.html
index c527c17..f73d2dd 100644
--- a/dev/auto_examples/plot_auto_repair.html
+++ b/dev/auto_examples/plot_auto_repair.html
@@ -548,531 +548,531 @@
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-100%|██████████| Creating augmented epochs : 204/204 [00:27<00:00, 7.52it/s]
+ 78%|███████▊ | Creating augmented epochs : 160/204 [00:21<00:05, 7.39it/s]
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+ 82%|████████▏ | Creating augmented epochs : 168/204 [00:22<00:04, 7.49it/s]
+ 83%|████████▎ | Creating augmented epochs : 169/204 [00:22<00:04, 7.46it/s]
+ 83%|████████▎ | Creating augmented epochs : 170/204 [00:23<00:04, 7.40it/s]
+ 84%|████████▍ | Creating augmented epochs : 171/204 [00:23<00:04, 7.40it/s]
+ 84%|████████▍ | Creating augmented epochs : 172/204 [00:23<00:04, 7.49it/s]
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+ 85%|████████▌ | Creating augmented epochs : 174/204 [00:23<00:04, 7.37it/s]
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+ 86%|████████▋ | Creating augmented epochs : 176/204 [00:23<00:03, 7.34it/s]
+ 87%|████████▋ | Creating augmented epochs : 177/204 [00:24<00:03, 7.42it/s]
+ 87%|████████▋ | Creating augmented epochs : 178/204 [00:24<00:03, 7.39it/s]
+ 88%|████████▊ | Creating augmented epochs : 179/204 [00:24<00:03, 7.34it/s]
+ 88%|████████▊ | Creating augmented epochs : 180/204 [00:24<00:03, 7.38it/s]
+ 89%|████████▊ | Creating augmented epochs : 181/204 [00:24<00:03, 7.47it/s]
+ 89%|████████▉ | Creating augmented epochs : 182/204 [00:24<00:02, 7.45it/s]
+ 90%|████████▉ | Creating augmented epochs : 183/204 [00:24<00:02, 7.39it/s]
+ 90%|█████████ | Creating augmented epochs : 184/204 [00:25<00:02, 7.34it/s]
+ 91%|█████████ | Creating augmented epochs : 185/204 [00:25<00:02, 7.30it/s]
+ 91%|█████████ | Creating augmented epochs : 186/204 [00:25<00:02, 7.34it/s]
+ 92%|█████████▏| Creating augmented epochs : 187/204 [00:25<00:02, 7.41it/s]
+ 92%|█████████▏| Creating augmented epochs : 188/204 [00:25<00:02, 7.41it/s]
+ 93%|█████████▎| Creating augmented epochs : 189/204 [00:25<00:02, 7.48it/s]
+ 93%|█████████▎| Creating augmented epochs : 190/204 [00:25<00:01, 7.54it/s]
+ 94%|█████████▎| Creating augmented epochs : 191/204 [00:25<00:01, 7.53it/s]
+ 94%|█████████▍| Creating augmented epochs : 192/204 [00:25<00:01, 7.61it/s]
+ 95%|█████████▍| Creating augmented epochs : 193/204 [00:26<00:01, 7.64it/s]
+ 95%|█████████▌| Creating augmented epochs : 194/204 [00:26<00:01, 7.63it/s]
+ 96%|█████████▌| Creating augmented epochs : 195/204 [00:26<00:01, 7.69it/s]
+ 96%|█████████▌| Creating augmented epochs : 196/204 [00:26<00:01, 7.61it/s]
+ 97%|█████████▋| Creating augmented epochs : 197/204 [00:26<00:00, 7.64it/s]
+ 97%|█████████▋| Creating augmented epochs : 198/204 [00:26<00:00, 7.69it/s]
+ 98%|█████████▊| Creating augmented epochs : 199/204 [00:26<00:00, 7.67it/s]
+ 98%|█████████▊| Creating augmented epochs : 200/204 [00:26<00:00, 7.74it/s]
+ 99%|█████████▊| Creating augmented epochs : 201/204 [00:27<00:00, 7.72it/s]
+ 99%|█████████▉| Creating augmented epochs : 202/204 [00:27<00:00, 7.78it/s]
+100%|█████████▉| Creating augmented epochs : 203/204 [00:27<00:00, 7.73it/s]
+100%|██████████| Creating augmented epochs : 204/204 [00:27<00:00, 7.64it/s]
+100%|██████████| Creating augmented epochs : 204/204 [00:27<00:00, 7.40it/s]
0%| | Computing thresholds ... : 0/204 [00:00<?, ?it/s]
- 0%| | Computing thresholds ... : 1/204 [00:00<00:21, 9.40it/s]
- 1%| | Computing thresholds ... : 2/204 [00:00<00:17, 11.35it/s]
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@@ -1842,48 +1842,48 @@
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@@ -1895,221 +1895,221 @@
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No bad epochs were found for your data. Returning a copy of the data you wanted to clean. Interpolation may have been done.
NOTE: pick_channels() is a legacy function. New code should use inst.pick(...).
NOTE: pick_channels() is a legacy function. New code should use inst.pick(...).
@@ -2154,7 +2154,7 @@
<Figure size 1200x600 with 1 Axes>
-Total running time of the script: (1 minutes 31.463 seconds)
+Total running time of the script: (1 minutes 32.597 seconds)
Download Python source code: plot_auto_repair.py
@@ -2227,7 +2227,7 @@
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/plot_autoreject_workflow.html b/dev/auto_examples/plot_autoreject_workflow.html
index 1657abd..6435ed2 100644
--- a/dev/auto_examples/plot_autoreject_workflow.html
+++ b/dev/auto_examples/plot_autoreject_workflow.html
@@ -451,7 +451,7 @@
with autoreject
and discusses decisions about when and which
other preprocessing steps to use in combination.
tldr: We recommend that you first highpass filter the data,
-then run autoreject (local) and supply the bad epochs detected by it
+then run autoreject (local) and supply the artifact-free epochs
to the ICA algorithm for a robust fit, and finally run
autoreject (local) again.
# Author: Alex Rockhill <aprockhill@mailbox.org>
@@ -501,61 +501,61 @@
🌍 Preparing to download ds002778 …
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@@ -629,69 +632,69 @@ Autoreject without an
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+ 50%|█████ | n_interp : 2/4 [00:01<00:01, 1.48it/s]
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+ 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 229.56it/s]
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+ 75%|███████▌ | Repairing epochs : 15/20 [00:00<00:00, 236.74it/s]
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+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 214.12it/s]
@@ -858,66 +858,63 @@ Autoreject without an
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+ 75%|███████▌ | n_interp : 3/4 [00:02<00:00, 1.48it/s]
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+ 30%|███ | Repairing epochs : 6/20 [00:00<00:00, 343.11it/s]
- 45%|████▌ | Repairing epochs : 9/20 [00:00<00:00, 258.86it/s]
+ 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 230.28it/s]
- 60%|██████ | Repairing epochs : 12/20 [00:00<00:00, 233.97it/s]
+ 75%|███████▌ | Repairing epochs : 15/20 [00:00<00:00, 235.85it/s]
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- 95%|█████████▌| Repairing epochs : 19/20 [00:00<00:00, 194.37it/s]
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+ 90%|█████████ | Repairing epochs : 18/20 [00:00<00:00, 200.80it/s]
+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 213.51it/s]
@@ -926,48 +923,48 @@ Autoreject without an
- 10%|█ | Fold : 1/10 [00:00<00:00, 13.25it/s]
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@@ -979,110 +976,101 @@ Autoreject without an
0%| | Repairing epochs : 0/97 [00:00<?, ?it/s]
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+ 15%|█▌ | Repairing epochs : 15/97 [00:00<00:00, 232.14it/s]
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+ 19%|█▊ | Repairing epochs : 18/97 [00:00<00:00, 202.34it/s]
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+ 25%|██▍ | Repairing epochs : 24/97 [00:00<00:00, 216.11it/s]
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+ 29%|██▉ | Repairing epochs : 28/97 [00:00<00:00, 203.12it/s]
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+ 33%|███▎ | Repairing epochs : 32/97 [00:00<00:00, 205.26it/s]
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+ 37%|███▋ | Repairing epochs : 36/97 [00:00<00:00, 208.07it/s]
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+ 79%|███████▉ | Repairing epochs : 77/97 [00:00<00:00, 149.66it/s]
- 79%|███████▉ | Repairing epochs : 77/97 [00:00<00:00, 141.31it/s]
+ 81%|████████▏ | Repairing epochs : 79/97 [00:00<00:00, 145.50it/s]
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+ 84%|████████▎ | Repairing epochs : 81/97 [00:00<00:00, 141.76it/s]
- 84%|████████▎ | Repairing epochs : 81/97 [00:00<00:00, 134.11it/s]
+ 86%|████████▌ | Repairing epochs : 83/97 [00:00<00:00, 138.96it/s]
- 86%|████████▌ | Repairing epochs : 83/97 [00:00<00:00, 131.87it/s]
+ 88%|████████▊ | Repairing epochs : 85/97 [00:00<00:00, 136.43it/s]
- 88%|████████▊ | Repairing epochs : 85/97 [00:00<00:00, 129.56it/s]
+ 90%|████████▉ | Repairing epochs : 87/97 [00:00<00:00, 133.76it/s]
- 90%|████████▉ | Repairing epochs : 87/97 [00:00<00:00, 126.69it/s]
+ 92%|█████████▏| Repairing epochs : 89/97 [00:00<00:00, 131.20it/s]
- 92%|█████████▏| Repairing epochs : 89/97 [00:00<00:00, 124.14it/s]
+ 94%|█████████▍| Repairing epochs : 91/97 [00:00<00:00, 128.96it/s]
- 94%|█████████▍| Repairing epochs : 91/97 [00:00<00:00, 122.33it/s]
+ 96%|█████████▌| Repairing epochs : 93/97 [00:00<00:00, 127.11it/s]
- 96%|█████████▌| Repairing epochs : 93/97 [00:00<00:00, 120.80it/s]
+ 98%|█████████▊| Repairing epochs : 95/97 [00:00<00:00, 125.25it/s]
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-
-
-100%|██████████| Repairing epochs : 97/97 [00:00<00:00, 117.40it/s]
-100%|██████████| Repairing epochs : 97/97 [00:00<00:00, 137.85it/s]
+100%|██████████| Repairing epochs : 97/97 [00:00<00:00, 123.25it/s]
+100%|██████████| Repairing epochs : 97/97 [00:00<00:00, 143.37it/s]
Dropped 27 epochs: 54, 58, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75, 76, 77, 78, 79, 80, 86, 89, 91, 92, 95, 96
@@ -1148,69 +1136,69 @@ Autoreject with high-
Running autoreject on ch_type=eeg
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- 44%|████▍ | Creating augmented epochs : 14/32 [00:00<00:00, 88.91it/s]
- 50%|█████ | Creating augmented epochs : 16/32 [00:00<00:00, 88.34it/s]
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- 62%|██████▎ | Creating augmented epochs : 20/32 [00:00<00:00, 87.81it/s]
- 69%|██████▉ | Creating augmented epochs : 22/32 [00:00<00:00, 86.64it/s]
- 75%|███████▌ | Creating augmented epochs : 24/32 [00:00<00:00, 86.86it/s]
- 81%|████████▏ | Creating augmented epochs : 26/32 [00:00<00:00, 86.99it/s]
- 88%|████████▊ | Creating augmented epochs : 28/32 [00:00<00:00, 86.85it/s]
- 94%|█████████▍| Creating augmented epochs : 30/32 [00:00<00:00, 86.80it/s]
-100%|██████████| Creating augmented epochs : 32/32 [00:00<00:00, 86.48it/s]
-100%|██████████| Creating augmented epochs : 32/32 [00:00<00:00, 86.87it/s]
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+ 50%|█████ | Creating augmented epochs : 16/32 [00:00<00:00, 89.09it/s]
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+ 62%|██████▎ | Creating augmented epochs : 20/32 [00:00<00:00, 88.61it/s]
+ 69%|██████▉ | Creating augmented epochs : 22/32 [00:00<00:00, 87.53it/s]
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+ 94%|█████████▍| Creating augmented epochs : 30/32 [00:00<00:00, 87.84it/s]
+100%|██████████| Creating augmented epochs : 32/32 [00:00<00:00, 87.50it/s]
+100%|██████████| Creating augmented epochs : 32/32 [00:00<00:00, 87.80it/s]
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+100%|██████████| Computing thresholds ... : 32/32 [00:10<00:00, 2.93it/s]
0%| | Repairing epochs : 0/20 [00:00<?, ?it/s]
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+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 423.82it/s]
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@@ -1219,29 +1207,29 @@ Autoreject with high-
0%| | Repairing epochs : 0/20 [00:00<?, ?it/s]
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+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 120.55it/s]
@@ -1250,69 +1238,69 @@ Autoreject with high-
- 10%|█ | Fold : 1/10 [00:00<00:00, 11.90it/s]
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+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 137.67it/s]
@@ -1321,72 +1309,72 @@ Autoreject with high-
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+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 139.51it/s]
@@ -1395,72 +1383,69 @@ Autoreject with high-
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-
+ 15%|█▌ | Repairing epochs : 3/20 [00:00<00:00, 163.14it/s]
- 35%|███▌ | Repairing epochs : 7/20 [00:00<00:00, 151.04it/s]
+ 35%|███▌ | Repairing epochs : 7/20 [00:00<00:00, 161.78it/s]
- 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 160.30it/s]
+ 55%|█████▌ | Repairing epochs : 11/20 [00:00<00:00, 179.43it/s]
- 65%|██████▌ | Repairing epochs : 13/20 [00:00<00:00, 161.24it/s]
+ 70%|███████ | Repairing epochs : 14/20 [00:00<00:00, 160.28it/s]
- 75%|███████▌ | Repairing epochs : 15/20 [00:00<00:00, 142.56it/s]
+ 80%|████████ | Repairing epochs : 16/20 [00:00<00:00, 143.85it/s]
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-
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+ 90%|█████████ | Repairing epochs : 18/20 [00:00<00:00, 137.96it/s]
+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 141.99it/s]
@@ -1469,48 +1454,48 @@ Autoreject with high-
- 10%|█ | Fold : 1/10 [00:00<00:00, 17.34it/s]
+ 10%|█ | Fold : 1/10 [00:00<00:00, 20.68it/s]
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@@ -1522,116 +1507,116 @@ Autoreject with high-
0%| | Repairing epochs : 0/97 [00:00<?, ?it/s]
- 3%|▎ | Repairing epochs : 3/97 [00:00<00:00, 158.41it/s]
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+ 65%|██████▍ | Repairing epochs : 63/97 [00:00<00:00, 123.21it/s]
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+ 67%|██████▋ | Repairing epochs : 65/97 [00:00<00:00, 121.09it/s]
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+ 71%|███████ | Repairing epochs : 69/97 [00:00<00:00, 118.96it/s]
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+ 73%|███████▎ | Repairing epochs : 71/97 [00:00<00:00, 118.29it/s]
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+ 76%|███████▋ | Repairing epochs : 74/97 [00:00<00:00, 120.74it/s]
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+ 79%|███████▉ | Repairing epochs : 77/97 [00:00<00:00, 123.01it/s]
- 82%|████████▏ | Repairing epochs : 80/97 [00:00<00:00, 122.19it/s]
+ 82%|████████▏ | Repairing epochs : 80/97 [00:00<00:00, 125.55it/s]
- 86%|████████▌ | Repairing epochs : 83/97 [00:00<00:00, 124.39it/s]
+ 86%|████████▌ | Repairing epochs : 83/97 [00:00<00:00, 127.80it/s]
- 89%|████████▊ | Repairing epochs : 86/97 [00:00<00:00, 125.97it/s]
+ 89%|████████▊ | Repairing epochs : 86/97 [00:00<00:00, 129.52it/s]
- 92%|█████████▏| Repairing epochs : 89/97 [00:00<00:00, 127.55it/s]
+ 92%|█████████▏| Repairing epochs : 89/97 [00:00<00:00, 131.34it/s]
- 95%|█████████▍| Repairing epochs : 92/97 [00:00<00:00, 129.15it/s]
+ 95%|█████████▍| Repairing epochs : 92/97 [00:00<00:00, 132.83it/s]
- 98%|█████████▊| Repairing epochs : 95/97 [00:00<00:00, 130.80it/s]
-100%|██████████| Repairing epochs : 97/97 [00:00<00:00, 129.16it/s]
+ 98%|█████████▊| Repairing epochs : 95/97 [00:00<00:00, 134.17it/s]
+100%|██████████| Repairing epochs : 97/97 [00:00<00:00, 132.79it/s]
Dropped 23 epochs: 62, 63, 64, 65, 67, 68, 69, 70, 71, 72, 73, 75, 76, 77, 78, 79, 80, 86, 89, 91, 92, 95, 96
@@ -1672,7 +1657,7 @@ ICAFitting ICA to data using 32 channels (please be patient, this may take a while)
Selecting by non-zero PCA components: 32 components
-Fitting ICA took 3.8s.
+Fitting ICA took 3.5s.
@@ -1780,69 +1765,69 @@ Autoreject with highp
Running autoreject on ch_type=eeg
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+ 88%|████████▊ | Creating augmented epochs : 28/32 [00:00<00:00, 89.94it/s]
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+100%|██████████| Creating augmented epochs : 32/32 [00:00<00:00, 89.49it/s]
+100%|██████████| Creating augmented epochs : 32/32 [00:00<00:00, 89.75it/s]
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+ 94%|█████████▍| Computing thresholds ... : 30/32 [00:10<00:00, 2.92it/s]
+ 97%|█████████▋| Computing thresholds ... : 31/32 [00:10<00:00, 2.92it/s]
+100%|██████████| Computing thresholds ... : 32/32 [00:10<00:00, 2.92it/s]
+100%|██████████| Computing thresholds ... : 32/32 [00:10<00:00, 2.93it/s]
0%| | Repairing epochs : 0/20 [00:00<?, ?it/s]
- 35%|███▌ | Repairing epochs : 7/20 [00:00<00:00, 407.98it/s]
+ 35%|███▌ | Repairing epochs : 7/20 [00:00<00:00, 421.43it/s]
- 70%|███████ | Repairing epochs : 14/20 [00:00<00:00, 406.77it/s]
-100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 404.51it/s]
+ 70%|███████ | Repairing epochs : 14/20 [00:00<00:00, 421.60it/s]
+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 416.32it/s]
0%| | n_interp : 0/4 [00:00<?, ?it/s]
@@ -1851,23 +1836,23 @@ Autoreject with highp
0%| | Repairing epochs : 0/20 [00:00<?, ?it/s]
- 30%|███ | Repairing epochs : 6/20 [00:00<00:00, 255.59it/s]
+ 30%|███ | Repairing epochs : 6/20 [00:00<00:00, 248.87it/s]
- 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 240.04it/s]
+ 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 242.94it/s]
- 65%|██████▌ | Repairing epochs : 13/20 [00:00<00:00, 222.28it/s]
+ 70%|███████ | Repairing epochs : 14/20 [00:00<00:00, 207.37it/s]
- 75%|███████▌ | Repairing epochs : 15/20 [00:00<00:00, 181.68it/s]
+ 80%|████████ | Repairing epochs : 16/20 [00:00<00:00, 176.52it/s]
- 85%|████████▌ | Repairing epochs : 17/20 [00:00<00:00, 159.63it/s]
+ 90%|█████████ | Repairing epochs : 18/20 [00:00<00:00, 158.51it/s]
- 95%|█████████▌| Repairing epochs : 19/20 [00:00<00:00, 145.12it/s]
-100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 145.62it/s]
+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 146.53it/s]
+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 151.19it/s]
@@ -1876,69 +1861,66 @@ Autoreject with highp
- 10%|█ | Fold : 1/10 [00:00<00:00, 10.78it/s]
+ 10%|█ | Fold : 1/10 [00:00<00:00, 11.89it/s]
- 20%|██ | Fold : 2/10 [00:00<00:00, 12.31it/s]
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+ 80%|████████ | Fold : 8/10 [00:00<00:00, 15.74it/s]
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+ 90%|█████████ | Fold : 9/10 [00:00<00:00, 15.72it/s]
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+100%|██████████| Fold : 10/10 [00:00<00:00, 15.61it/s]
- 25%|██▌ | n_interp : 1/4 [00:00<00:02, 1.13it/s]
+ 25%|██▌ | n_interp : 1/4 [00:00<00:02, 1.27it/s]
0%| | Repairing epochs : 0/20 [00:00<?, ?it/s]
- 30%|███ | Repairing epochs : 6/20 [00:00<00:00, 288.63it/s]
-
+ 30%|███ | Repairing epochs : 6/20 [00:00<00:00, 310.54it/s]
- 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 246.36it/s]
+ 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 267.67it/s]
- 65%|██████▌ | Repairing epochs : 13/20 [00:00<00:00, 223.95it/s]
+ 70%|███████ | Repairing epochs : 14/20 [00:00<00:00, 217.78it/s]
- 75%|███████▌ | Repairing epochs : 15/20 [00:00<00:00, 180.88it/s]
+ 80%|████████ | Repairing epochs : 16/20 [00:00<00:00, 183.69it/s]
- 85%|████████▌ | Repairing epochs : 17/20 [00:00<00:00, 160.59it/s]
-
- 95%|█████████▌| Repairing epochs : 19/20 [00:00<00:00, 154.07it/s]
-100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 157.90it/s]
+ 90%|█████████ | Repairing epochs : 18/20 [00:00<00:00, 165.79it/s]
+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 164.87it/s]
@@ -1947,69 +1929,69 @@ Autoreject with highp
- 10%|█ | Fold : 1/10 [00:00<00:00, 10.58it/s]
+ 10%|█ | Fold : 1/10 [00:00<00:00, 11.43it/s]
- 20%|██ | Fold : 2/10 [00:00<00:00, 11.90it/s]
+ 20%|██ | Fold : 2/10 [00:00<00:00, 13.44it/s]
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+ 90%|█████████ | Fold : 9/10 [00:00<00:00, 16.03it/s]
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+100%|██████████| Fold : 10/10 [00:00<00:00, 15.90it/s]
- 50%|█████ | n_interp : 2/4 [00:01<00:01, 1.11it/s]
+ 50%|█████ | n_interp : 2/4 [00:01<00:01, 1.29it/s]
0%| | Repairing epochs : 0/20 [00:00<?, ?it/s]
- 25%|██▌ | Repairing epochs : 5/20 [00:00<00:00, 285.30it/s]
+ 30%|███ | Repairing epochs : 6/20 [00:00<00:00, 302.94it/s]
- 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 224.85it/s]
+ 50%|█████ | Repairing epochs : 10/20 [00:00<00:00, 258.47it/s]
- 65%|██████▌ | Repairing epochs : 13/20 [00:00<00:00, 211.89it/s]
+ 65%|██████▌ | Repairing epochs : 13/20 [00:00<00:00, 236.40it/s]
- 75%|███████▌ | Repairing epochs : 15/20 [00:00<00:00, 176.01it/s]
+ 75%|███████▌ | Repairing epochs : 15/20 [00:00<00:00, 191.66it/s]
- 85%|████████▌ | Repairing epochs : 17/20 [00:00<00:00, 157.26it/s]
+ 85%|████████▌ | Repairing epochs : 17/20 [00:00<00:00, 170.16it/s]
- 95%|█████████▌| Repairing epochs : 19/20 [00:00<00:00, 148.70it/s]
-100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 152.84it/s]
+ 95%|█████████▌| Repairing epochs : 19/20 [00:00<00:00, 158.56it/s]
+100%|██████████| Repairing epochs : 20/20 [00:00<00:00, 163.27it/s]
@@ -2018,69 +2000,66 @@ Autoreject with highp
- 10%|█ | Fold : 1/10 [00:00<00:00, 10.65it/s]
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Dropped 11 epochs: 62, 63, 64, 65, 69, 71, 72, 73, 80, 95, 96
/home/circleci/project/examples/plot_autoreject_workflow.py:182: FutureWarning: The current default events=None is deprecated and will change to events=True in MNE 1.6. Set events=False to suppress this warning.
epochs[reject_log.bad_epochs].plot(scalings=dict(eeg=100e-6))
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No bad epochs were found for your data. Returning a copy of the data you wanted to clean. Interpolation may have been done.
Number of epochs originally: 97, after autoreject: 97
@@ -2435,7 +2405,7 @@ Autoreject with highp
is no subsitute for visual inspection. Irrespective of the rejection
method used, we highly recommend users to inspect their preprocessed
data before further analyses.
-Total running time of the script: (1 minutes 6.934 seconds)
+Total running time of the script: (1 minutes 3.671 seconds)
Download Python source code: plot_autoreject_workflow.py
@@ -2526,7 +2496,7 @@ Autoreject with highp
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/plot_channel_thresholds.html b/dev/auto_examples/plot_channel_thresholds.html
index 81d9d13..1a6f519 100644
--- a/dev/auto_examples/plot_channel_thresholds.html
+++ b/dev/auto_examples/plot_channel_thresholds.html
@@ -504,210 +504,210 @@
warnings.warn(
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Finally, let us plot a histogram of the channel-level thresholds to verify
@@ -732,7 +732,7 @@
plt.show()
-Total running time of the script: (0 minutes 12.576 seconds)
+Total running time of the script: (0 minutes 12.770 seconds)
Download Python source code: plot_channel_thresholds.py
@@ -805,7 +805,7 @@
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/plot_estimate_global_reject.html b/dev/auto_examples/plot_estimate_global_reject.html
index f3dcce9..6035b70 100644
--- a/dev/auto_examples/plot_estimate_global_reject.html
+++ b/dev/auto_examples/plot_estimate_global_reject.html
@@ -538,7 +538,7 @@
<Figure size 640x500 with 6 Axes>
-Total running time of the script: (0 minutes 3.392 seconds)
+Total running time of the script: (0 minutes 3.274 seconds)
Download Python source code: plot_estimate_global_reject.py
@@ -611,7 +611,7 @@
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/plot_global_reject.html b/dev/auto_examples/plot_global_reject.html
index 4c7b833..8c0377d 100644
--- a/dev/auto_examples/plot_global_reject.html
+++ b/dev/auto_examples/plot_global_reject.html
@@ -552,7 +552,7 @@
plt.show()
-Total running time of the script: (0 minutes 1.995 seconds)
+Total running time of the script: (0 minutes 1.985 seconds)
Download Python source code: plot_global_reject.py
@@ -625,7 +625,7 @@
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/plot_ransac.html b/dev/auto_examples/plot_ransac.html
index 09cb1e3..12a2d84 100644
--- a/dev/auto_examples/plot_ransac.html
+++ b/dev/auto_examples/plot_ransac.html
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[Done]
Interpolating bad channels
Automatic origin fit: head of radius 91.0 mm
@@ -749,7 +749,7 @@ Referencesplt.show()
-Total running time of the script: (1 minutes 12.114 seconds)
+Total running time of the script: (1 minutes 7.621 seconds)
Download Python source code: plot_ransac.py
@@ -837,7 +837,7 @@ References
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/plot_visualize_bad_epochs.html b/dev/auto_examples/plot_visualize_bad_epochs.html
index 05fe03e..fc6250b 100644
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Running autoreject on ch_type=eeg
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+ 98%|█████████▊| Repairing epochs : 193/197 [00:02<00:00, 64.42it/s]
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+ 89%|████████▉ | Repairing epochs : 176/197 [00:02<00:00, 73.16it/s]
- 89%|████████▉ | Repairing epochs : 176/197 [00:02<00:00, 69.85it/s]
+ 90%|█████████ | Repairing epochs : 178/197 [00:02<00:00, 72.93it/s]
- 90%|█████████ | Repairing epochs : 178/197 [00:02<00:00, 69.89it/s]
+ 91%|█████████▏| Repairing epochs : 180/197 [00:02<00:00, 72.63it/s]
- 91%|█████████ | Repairing epochs : 179/197 [00:02<00:00, 68.78it/s]
+ 92%|█████████▏| Repairing epochs : 181/197 [00:02<00:00, 70.97it/s]
- 91%|█████████▏| Repairing epochs : 180/197 [00:02<00:00, 66.81it/s]
+ 93%|█████████▎| Repairing epochs : 183/197 [00:02<00:00, 69.67it/s]
- 92%|█████████▏| Repairing epochs : 181/197 [00:02<00:00, 65.43it/s]
+ 93%|█████████▎| Repairing epochs : 184/197 [00:02<00:00, 67.82it/s]
- 93%|█████████▎| Repairing epochs : 183/197 [00:02<00:00, 66.23it/s]
+ 94%|█████████▍| Repairing epochs : 185/197 [00:02<00:00, 66.43it/s]
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+ 94%|█████████▍| Repairing epochs : 186/197 [00:02<00:00, 64.67it/s]
- 95%|█████████▍| Repairing epochs : 187/197 [00:02<00:00, 66.76it/s]
+ 95%|█████████▍| Repairing epochs : 187/197 [00:02<00:00, 64.53it/s]
- 95%|█████████▌| Repairing epochs : 188/197 [00:02<00:00, 66.55it/s]
+ 95%|█████████▌| Repairing epochs : 188/197 [00:02<00:00, 64.43it/s]
- 96%|█████████▋| Repairing epochs : 190/197 [00:02<00:00, 66.95it/s]
+ 96%|█████████▋| Repairing epochs : 190/197 [00:02<00:00, 65.42it/s]
- 97%|█████████▋| Repairing epochs : 191/197 [00:02<00:00, 65.62it/s]
+ 97%|█████████▋| Repairing epochs : 191/197 [00:02<00:00, 64.19it/s]
- 97%|█████████▋| Repairing epochs : 192/197 [00:02<00:00, 63.85it/s]
+ 97%|█████████▋| Repairing epochs : 192/197 [00:02<00:00, 62.62it/s]
- 98%|█████████▊| Repairing epochs : 193/197 [00:02<00:00, 63.35it/s]
+ 98%|█████████▊| Repairing epochs : 193/197 [00:02<00:00, 61.10it/s]
- 99%|█████████▉| Repairing epochs : 195/197 [00:02<00:00, 63.60it/s]
+ 98%|█████████▊| Repairing epochs : 194/197 [00:02<00:00, 61.10it/s]
-100%|██████████| Repairing epochs : 197/197 [00:02<00:00, 63.95it/s]
-100%|██████████| Repairing epochs : 197/197 [00:02<00:00, 68.17it/s]
+ 99%|█████████▉| Repairing epochs : 196/197 [00:02<00:00, 61.58it/s]
+100%|██████████| Repairing epochs : 197/197 [00:02<00:00, 68.93it/s]
No bad epochs were found for your data. Returning a copy of the data you wanted to clean. Interpolation may have been done.
@@ -2744,7 +2776,7 @@
<Figure size 640x300 with 2 Axes>
-Total running time of the script: (1 minutes 53.874 seconds)
+Total running time of the script: (1 minutes 53.207 seconds)
Download Python source code: plot_visualize_bad_epochs.py
@@ -2817,7 +2849,7 @@
- © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-25.
+ © Copyright 2016-2023, autoreject developers. Last updated on 2023-08-27.
diff --git a/dev/auto_examples/sg_execution_times.html b/dev/auto_examples/sg_execution_times.html
index 40bad36..943fc1a 100644
--- a/dev/auto_examples/sg_execution_times.html
+++ b/dev/auto_examples/sg_execution_times.html
@@ -416,35 +416,35 @@
Computation times#
-06:02.349 total execution time for auto_examples files:
+05:55.125 total execution time for auto_examples files: