From 809158d5fb4088706c303a22da9853ff7d7332dd Mon Sep 17 00:00:00 2001 From: Ernesto Diaz Date: Fri, 20 Dec 2024 14:56:49 -0800 Subject: [PATCH 1/2] added a yaml file --- datasets/ucsf-rmac.yaml | 49 +++++++++++++++++++++++++++++++++++++++++ 1 file changed, 49 insertions(+) create mode 100644 datasets/ucsf-rmac.yaml diff --git a/datasets/ucsf-rmac.yaml b/datasets/ucsf-rmac.yaml new file mode 100644 index 000000000..dc3119d56 --- /dev/null +++ b/datasets/ucsf-rmac.yaml @@ -0,0 +1,49 @@ +Name: UCSF Renal Mass CT Dataset +Description: This dataset provides a set of 831 3D Multiphase CT exams of renal masses, registered across phases with annotations identifying the masses +Documentation: https://github.com/LarsonLab/UCSF-RMaC +Contact: "[Peder Larson](peder.larson@ucsf.edu)]" +ManagedBy: "[UCSF Larson Advanced Imaging Lab](https://larsonlab.github.io/)" +UpdateFrequency: ad hoc +Tags: + - aws-pds + - cancer + - life sciences + - computed tomography + - medicine + - medical imaging + - radiology +License: https://creativecommons.org/licenses/by/4.0/ +Citation: +Resources: + - Description: + ARN: + Region: + Type: + Explore: +DataAtWork: + Tutorials: + - Title: Label Exploration Tutorial + URL: https://github.com/LarsonLab/UCSF-RMaC/blob/main/tutorials/labelexploration.ipynb + NotebookURL: + AuthorName: Sule Sahin + AuthorURL: https://github.com/sule-sahin + Services: S3 + - Title: Mask Overlays + URL: https://github.com/LarsonLab/UCSF-RMaC/blob/main/tutorials/maskoverlays.ipynb + NotebookURL: + AuthorName: Sule Sahin + AuthorURL: https://github.com/sule-sahin + Services: S3 + Tools & Applications: + - Title: UCSF Renal Mass CT Dataset + URL: https://github.com/LarsonLab/UCSF-RMaC + AuthorName: Peder Larson + AuthorURL: https://scholar.google.com/citations?user=LrQ7YekAAAAJ&hl=en + Publications: + - Title: + URL: + AuthorName: + AuthorURL: +DeprecatedNotice: +ADXCategories: Healthcare & Life Sciences Data + - \ No newline at end of file From 86888d9ee417c50e55c18d2a57b0ce2caaa5ac4f Mon Sep 17 00:00:00 2001 From: Ernesto Diaz Date: Thu, 30 Jan 2025 14:59:23 -0800 Subject: [PATCH 2/2] updated yaml --- datasets/ucsf-rmac.yaml | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/datasets/ucsf-rmac.yaml b/datasets/ucsf-rmac.yaml index dc3119d56..0ad543427 100644 --- a/datasets/ucsf-rmac.yaml +++ b/datasets/ucsf-rmac.yaml @@ -15,11 +15,11 @@ Tags: License: https://creativecommons.org/licenses/by/4.0/ Citation: Resources: - - Description: - ARN: - Region: - Type: - Explore: + - Description: Renal Mass CT Data on S3 + ARN: arn:aws:s3:::ucsf-rmac-dataset + Region: us-west-2 + Type: S3 Bucket + Explore: https://s3.console.aws.amazon.com/s3/buckets/ucsf-rmac-dataset DataAtWork: Tutorials: - Title: Label Exploration Tutorial