From b25e7e943fe2946d52e73b712293eabbe7bb9d93 Mon Sep 17 00:00:00 2001 From: eberdan Date: Mon, 3 Jun 2024 15:17:29 -0400 Subject: [PATCH] Update QC_nf-core.Rmd made summary graph x-axis labels vertical and removed legend. --- inst/rmarkdown/templates/rnaseq/skeleton/QC/QC_nf-core.Rmd | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/inst/rmarkdown/templates/rnaseq/skeleton/QC/QC_nf-core.Rmd b/inst/rmarkdown/templates/rnaseq/skeleton/QC/QC_nf-core.Rmd index b69265c..a2c7bdc 100644 --- a/inst/rmarkdown/templates/rnaseq/skeleton/QC/QC_nf-core.Rmd +++ b/inst/rmarkdown/templates/rnaseq/skeleton/QC/QC_nf-core.Rmd @@ -144,7 +144,7 @@ meta_df <- data.frame(meta_df[,!(colnames(meta_df) %in% c("fastq_1", "fastq_2", ggplot(meta_df, aes(.data[[factor_of_interest]], fill = .data[[factor_of_interest]])) + geom_bar() + ylab("") + xlab("") + ylab("# of samples") + - scale_fill_cb_friendly() + scale_fill_cb_friendly() + theme(axis.text.x=element_text(angle = 90, vjust = 0.5), legend.position = "none") ```