diff --git a/inst/templates/rnaseq/00_libs/FA.R b/inst/templates/rnaseq/00_libs/FA.R index 7d09d0e..b5f5b0f 100644 --- a/inst/templates/rnaseq/00_libs/FA.R +++ b/inst/templates/rnaseq/00_libs/FA.R @@ -3,14 +3,14 @@ library(clusterProfiler) source <- "https://github.com/bcbio/resources/raw/refs/heads/main/gene_sets/gene_sets/20240904" get_databases_v2=function(sps="human"){ gmt.files=list(human=c("h.all.v2024.1.Hs.entrez.gmt", - "c5.go.v2024.1.Hs.entrez.gmt", + #"c5.go.v2024.1.Hs.entrez.gmt", "c5.go.mf.v2024.1.Hs.entrez.gmt", "c5.go.cc.v2024.1.Hs.entrez.gmt", "c5.go.bp.v2024.1.Hs.entrez.gmt", "c2.cp.reactome.v2024.1.Hs.entrez.gmt", "c2.cp.kegg_legacy.v2024.1.Hs.entrez.gmt"), mouse=c("mh.all.v2024.1.Mm.entrez.gmt", - "m5.go.v2024.1.Mm.entrez.gmt", + #"m5.go.v2024.1.Mm.entrez.gmt", "m5.go.mf.v2024.1.Mm.entrez.gmt", "m5.go.cc.v2024.1.Mm.entrez.gmt", "m5.go.bp.v2024.1.Mm.entrez.gmt",