diff --git a/docs/tools.rst b/docs/tools.rst index 088dd02..751a351 100644 --- a/docs/tools.rst +++ b/docs/tools.rst @@ -275,9 +275,9 @@ Example: .. code:: shell - --duckdb_max_memory "The maximum amount of memory allocated by the DuckDB engine (e.g 4GB)" - --duckdb_threads "The number of threads for the DuckDB engine (e.g 4)" - --file_num "The number of files being processed at the same time (default 100)" + --duckdb_max_memory The maximum amount of memory allocated by the DuckDB engine (e.g 4GB) + --duckdb_threads The number of threads for the DuckDB engine (e.g 4) + --file_num The number of files being processed at the same time (default 100) Inject some messages for DiaNN ------------------------------- @@ -300,7 +300,7 @@ Example: quantmsio_cli inject-start-and-end-from-fasta --parquet_path PXD010154_map_protein_accession-88d63fca-3ae6-4eab-9262-6e7a68184432.feature.parquet - --fasta_path "D:\converter\AE\Homo-sapiens-uniprot-reviewed-contaminants-decoy-202210.fasta" + --fasta_path Homo-sapiens-uniprot-reviewed-contaminants-decoy-202210.fasta --label feature --output_path PXD010154.feature.parquet diff --git a/python/quantmsio/quantms_io/report/index.html b/python/quantmsio/quantms_io/report/index.html deleted file mode 100644 index f2882cf..0000000 --- a/python/quantmsio/quantms_io/report/index.html +++ /dev/null @@ -1,269 +0,0 @@ - - - - - - report - - - -
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Distribution of Ibaq values:

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