diff --git a/.nf-core.yml b/.nf-core.yml
index 7f2f983e..675b27bf 100644
--- a/.nf-core.yml
+++ b/.nf-core.yml
@@ -6,11 +6,14 @@ lint:
     - conf/test.config
     - .github/workflows/awstest.yml
     - .github/workflows/awsfulltest.yml
+    - .github/workflows/ci.yml
+    - .gitignore
   files_unchanged:
     - .github/PULL_REQUEST_TEMPLATE.md
     - .github/CONTRIBUTING.md
     - docs/README.md
   multiqc_config: false
+  nextflow_config: false
 nf_core_version: 3.0.2
 org_path: null
 repository_type: pipeline