Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

The itransfer commands fail if not called from the correct path #32

Open
holtgrewe opened this issue Feb 19, 2021 · 0 comments
Open

The itransfer commands fail if not called from the correct path #32

holtgrewe opened this issue Feb 19, 2021 · 0 comments

Comments

@holtgrewe
Copy link
Member

Describe the bug
For example, snappy itransfer-raw-data fails when issued from the variant_calling folder.

Expected behavior
The search path should be based on the location of the .snappy_pipeline folder.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
None yet
Projects
None yet
Milestone
No milestone
Development

No branches or pull requests
1 participant
@holtgrewe