From 7a3e131e5b15157f2a9dfcea815d1a752173160a Mon Sep 17 00:00:00 2001 From: Manuel Holtgrewe Date: Sat, 18 Nov 2023 17:42:29 +0100 Subject: [PATCH] chore: bump clinvar data in readme --- README.md | 26 +++++++++++++------------- 1 file changed, 13 insertions(+), 13 deletions(-) diff --git a/README.md b/README.md index 87be4db..cbb7a3e 100644 --- a/README.md +++ b/README.md @@ -266,33 +266,33 @@ reev-server-worker db to-bin \ ``` To obtain ClinVar, use the following. -Note that this will install the data from October 15, 2023 and you might want to [look here for the latest release](https://github.com/bihealth/annonars-data-clinvar/releases). +Note that this will install the data from November 12, 2023 and you might want to [look here for the latest release](https://github.com/bihealth/annonars-data-clinvar/releases). ```bash session -wget -O /tmp/annonars-clinvar-minimal-grch37-20231015+0.24.1.tar.gz \ - https://github.com/bihealth/annonars-data-clinvar/releases/download/annonars-data-clinvar-20231015/annonars-clinvar-minimal-grch37-20231015+0.24.1.tar.gz -wget -O /tmp/annonars-clinvar-minimal-grch38-20231015+0.24.1.tar.gz \ - https://github.com/bihealth/annonars-data-clinvar/releases/download/annonars-data-clinvar-20231015/annonars-clinvar-minimal-grch38-20231015+0.24.1.tar.gz +wget -O /tmp/annonars-clinvar-minimal-grch37-20231112+0.24.5.tar.gz \ + https://github.com/bihealth/annonars-data-clinvar/releases/download/annonars-data-clinvar-20231112/annonars-clinvar-minimal-grch37-20231112+0.24.5.tar.gz +wget -O /tmp/annonars-clinvar-minimal-grch38-20231112+0.24.5.tar.gz \ + https://github.com/bihealth/annonars-data-clinvar/releases/download/annonars-data-clinvar-20231112/annonars-clinvar-minimal-grch38-20231112+0.24.5.tar.gz tar -C .dev/volumes/reev-static/data/download/annonars/ \ - -xf /tmp/annonars-clinvar-minimal-grch37-20231015+0.24.1.tar.gz + -xf /tmp/annonars-clinvar-minimal-grch37-20231112+0.24.5.tar.gz tar -C .dev/volumes/reev-static/data/download/annonars \ - -xf /tmp/annonars-clinvar-minimal-grch38-20231015+0.24.1.tar.gz + -xf /tmp/annonars-clinvar-minimal-grch38-20231112+0.24.5.tar.gz rm -f .dev/volumes/reev-static/data/annonars/grch37/clinvar -ln -sr .dev/volumes/reev-static/data/download/annonars/annonars-clinvar-minimal-grch37-20231015+0.24.1 \ +ln -sr .dev/volumes/reev-static/data/download/annonars/annonars-clinvar-minimal-grch37-20231112+0.24.5 \ .dev/volumes/reev-static/data/annonars/grch37/clinvar rm -f .dev/volumes/reev-static/data/annonars/grch38/clinvar -ln -sr .dev/volumes/reev-static/data/download/annonars/annonars-clinvar-minimal-grch38-20231015+0.24.1 \ +ln -sr .dev/volumes/reev-static/data/download/annonars/annonars-clinvar-minimal-grch38-20231112+0.24.5 \ .dev/volumes/reev-static/data/annonars/grch38/clinvar -wget -O /tmp/annonars-clinvar-genes-20231015+0.24.1.tar.gz \ - https://github.com/bihealth/annonars-data-clinvar/releases/download/annonars-data-clinvar-20231015/annonars-clinvar-genes-20231015+0.24.1.tar.gz +wget -O /tmp/annonars-clinvar-genes-20231112+0.24.5.tar.gz \ + https://github.com/bihealth/annonars-data-clinvar/releases/download/annonars-data-clinvar-20231112/annonars-clinvar-genes-20231112+0.24.5.tar.gz tar -C .dev/volumes/reev-static/data/download/annonars \ - -xf /tmp/annonars-clinvar-genes-20231015+0.24.1.tar.gz + -xf /tmp/annonars-clinvar-genes-20231112+0.24.5.tar.gz rm -f .dev/volumes/reev-static/data/annonars/clinvar-genes -ln -sr .dev/volumes/reev-static/data/download/annonars/annonars-clinvar-genes-20231015+0.24.1 \ +ln -sr .dev/volumes/reev-static/data/download/annonars/annonars-clinvar-genes-20231112+0.24.5 \ .dev/volumes/reev-static/data/annonars/clinvar-genes ```