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Search or URL lookup for some genes and/or ensembl gene_ids fails to render a page #584

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Nicolai-vKuegelgen opened this issue Mar 20, 2024 · 1 comment
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@Nicolai-vKuegelgen
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Describe the bug
When trying to look up some genes (either by name or by ensembl gene id), REEV may fail to render a proper page (possibly instead of giving a "This gene_id can not be found" result).
I have so far found two different instances of this issue:
A) Some gene_ids are not found when searched for in REEV, but when when trying to access them by URL (https://reev.bihealth.org/gene/<gene_id>), REEV tries to render a result page instead of giving the "empty search result".
Examples: ENSG00000242029, ENSG00000241257
B) Some genes seem to be present in the REEV db (apparent because searching for their gene_id redirects to a URL with the gene name), but do not render to a meaningful result page.
Examples: RLIG1P2 / ENSG00000244561; MIR4445 / ENSG00000265956; OR4K8P / ENSG00000266693; RNU6-1210P / ENSG00000200645

To Reproduce
Steps to reproduce the behavior:
Either

  1. Search manually for one of the gene names or ids listed as examples above on https://reev.bihealth.org/
    or
  2. Use a direct URL to look them up: https://reev.bihealth.org/gene/<gene_id/gene_name>

Expected behavior
Genes without any information in the REEV database should just give that information. Genes, which are present in the db, should render at least minimal Information

Screenshots
A)
https://reev.bihealth.org/gene/ENSG00000242029
image

B)
https://reev.bihealth.org/gene/OR4K8P?genomeBuild=grch37
image

Desktop:

  • OS: Ubuntu 22.04
  • Browser: Firefox
  • Version: 123.0.1 (64-bit)
@gromdimon
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Related to varfish-org/annonars#436

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