uta_update.yml

name: UTA Update

on:
  workflow_dispatch:
    inputs:
      genome-build:
        description: Genome build
        type: choice
        options:
          - GRCh37
          - GRCh38
        default: GRCh38
      run-fetch-data:
        description: Fetch data with mirrors-ncbi
        type: boolean
        default: false
      run-build-seqrepo:
        description: Build SeqRepo
        type: boolean
        default: false
      run-push-seqrepo:
        description: Push SeqRepo to download area
        type: boolean
        default: false
      run-prepare-loading:
        description: Prepare files for loading
        type: boolean
        default: false
      run-create-load-db:
        description: Create loading database
        type: boolean
        default: false
      run-load-data:
        description: Load data
        type: boolean
        default: false
      run-custom-transcripts:
        description: Add custom transcript alignments
        type: boolean
        default: false
      run-rename-db:
        description: Rename database
        type: boolean
        default: false
      run-create-update-ncbi-schema:
        description: Create & update ncbi schema
        type: boolean
        default: false
      run-dumb-new-db:
        description: Dumb new database
        type: boolean
        default: false
      run-deploy-db-for-testing:
        description: Deploy new database for testing
        type: boolean
        default: false
      run-test-build:
        description: Test build
        type: boolean
        default: false
      run-deploy-to-production:
        description: Deploy to production
        type: boolean
        default: false

jobs:
  summarize-inputs:
    name: Workflow inputs
    runs-on: ubuntu-latest
    steps:
      - name: Dump GHA inputs to summary page
        uses: actions/github-script@v6
        env:
          INPUTS_JSON: ${{ toJson(inputs) }}
        with:
          script: |
            await core.summary
            .addHeading('Inputs')
            .addCodeBlock(JSON.stringify(JSON.parse(process.env.INPUTS_JSON), null, 2), 'json')
            .write()