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Store a tree, and provide means to subset #6

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wasade opened this issue Jan 16, 2017 · 1 comment

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server-side-support

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wasade commented Jan 16, 2017

Remap tip names as to avoid the overhead of the length of the strings
compress as tree will be large
load into balanced parentheses to make it fast
if samples, shear/prune based on all observations in samples
if observations, shear/prune based on provided observations
write tree

When a tree is loaded, it must include all observations in db, err otherwise. It must support having more tips in the tree than exist in the db.

When a table is loaded, if any observation in the table does not exist in the tree, the table cannot be loaded.

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wasade commented Dec 19, 2022

This would be nice. However, I think this necessitates server side support as otherwise the size of the tree is problematic.

wasade added the server-side-support label

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