run-tests.yml

name: Tests

on:
  push: {}
  workflow_dispatch: {}
  pull_request:
    branches:
      - master

jobs:
  build_package_and_run_tests:
    runs-on: ubuntu-20.04
    strategy:
      fail-fast: false
      matrix:
        python-version: [ "3.6", "3.7", "3.8", "3.9", "3.10", "3.11" ]
    steps:
      - name: Checkout source
        uses: actions/checkout@v3
      - name: Set up Python ${{ matrix.python-version }}
        uses: actions/setup-python@v4
        with:
          python-version: ${{ matrix.python-version }}
      - name: Upgrade pip
        run: pip install --upgrade pip
      - name: Install Package Dependencies
        run: pip install .
        if: (matrix.python-version != 2.7) && (matrix.python-version != 3.6)
      - name: Install Dependencies mannually for Py2.7 or Py3.6
        run: pip install requests
        if: (matrix.python-version == 2.7) || (matrix.python-version == 3.6)
      - name: Install coverage
        run: pip install coverage
        if: matrix.python-version == 3.10
      - name: Run Tests with coverage
        # only need to run coverage once on selected Python version
        run: coverage run --source . -m unittest tests/*.py
        if: matrix.python-version == 3.10
      - name: Coverage report
        run: |
          coverage report -m
          # generate coverage.xml output
          coverage xml
          # upload coverage to codacy
          bash <(curl -Ls https://coverage.codacy.com/get.sh) report -r coverage.xml
        env:
          CODACY_PROJECT_TOKEN: ${{ secrets.CODACY_PROJECT_TOKEN }}
        if: matrix.python-version == 3.10

      - name: Run Tests
        run: python -m unittest tests/*.py
        if: (matrix.python-version != 2.7) && (matrix.python-version != 3.6) && (matrix.python-version != 3.10)
      - name: Run Tests
        # since we cannot install packages in Py<3.7, we will use biothings_client
        # directly from the current working directory
        # `python -m unittest tests/*.py` does not work in Py2.7, so we run tests differently below
        run: PYTHONPATH=. python tests/test.py
        if: (matrix.python-version == 2.7) || (matrix.python-version == 3.6)