test-sundials.yml

name: Test scikits-odes-sundials

on: [push, pull_request]

jobs:
  tests:

    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        include:
          #- python-version: "3.7"
          #  sundials-version: "7.1.1"
          #  tox-env: py37
          #  sundials-precision: double
          #  sundials-index-size: 64
          - python-version: "3.8"
            sundials-version: "7.1.1"
            tox-env: py38
            sundials-precision: double
            sundials-index-size: 64
          - python-version: "3.9"
            sundials-version: "7.1.1"
            tox-env: py39
            sundials-precision: double
            sundials-index-size: 64
          - python-version: "3.10"
            sundials-version: "7.1.1"
            tox-env: py310
            sundials-precision: double
            sundials-index-size: 64
          - python-version: "3.11"
            sundials-version: "7.1.1"
            tox-env: py311
            sundials-precision: double
            sundials-index-size: 64
          - python-version: "3.12"
            sundials-version: "7.1.1"
            tox-env: py312
            sundials-precision: double
            sundials-index-size: 64
          - python-version: "3.13"
            sundials-version: "7.1.1"
            tox-env: py313
            sundials-precision: double
            sundials-index-size: 64
          - python-version: "3.11"
            sundials-version: "7.1.1"
            tox-env: check-manifest
            sundials-precision: double
            sundials-index-size: 64
          #- python-version: "3.11"
          #  sundials-version: "7.1.1"
          #  tox-env: checkreadme
          #  sundials-precision: double
          #  sundials-index-size: 64
          - python-version: "3.11"
            sundials-version: "7.1.1"
            tox-env: py311
            sundials-precision: double
            sundials-index-size: 32
          #- python-version: "3.11"
          #  sundials-version: "7.1.1"
          #  tox-env: py311
          #  sundials-precision: single
          #  sundials-index-size: 64
          - python-version: "3.11"
            sundials-version: "7.1.1"
            tox-env: py311
            sundials-precision: extended
            sundials-index-size: 64

    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0
    - name: Set up Python ${{ matrix.python-version }}
      uses: actions/setup-python@v5
      with:
        python-version: ${{ matrix.python-version }}
    - name: Install build dependencies
      run: sudo apt-get install gfortran liblapack-dev

    - name: Sundials cache
      uses: actions/cache@v4
      with:
        path: ~/sundials
        key: ${{ runner.os }}-sundials-${{ matrix.sundials-version }}
        restore-keys: |
          ${{ runner.os }}-sundials-

    - name: Install sundials
      run: |
        source ci_support/ensure_sundials_installed.sh &&
        printf "export LD_LIBRARY_PATH=$LD_LIBRARY_PATH\n export LIBRARY_PATH=$LIBRARY_PATH\n export CPATH=$CPATH" > sundials_env.sh
      env:
        SUNDIALS_VERSION: ${{ matrix.sundials-version }}
        SUNDIALS_PRECISION: ${{ matrix.sundials-precision }}
        SUNDIALS_INDEX_SIZE: ${{ matrix.sundials-index-size }}

    - name: Get pip cache dir
      id: pip-cache
      run: |
        echo "::set-output name=dir::$(pip cache dir)"

    - name: pip cache
      uses: actions/cache@v4
      with:
        path: ${{ steps.pip-cache.outputs.dir }}
        key: ${{ runner.os }}-pip-1
        restore-keys: |
          ${{ runner.os }}-pip-

    - name: Install python dependencies
      run: |
        python -m pip install --upgrade pip
        python -m pip install "setuptools<=64.0.0"
        python -m pip install --upgrade tox

    - name: Run tests
      run: |
        cat sundials_env.sh
        source sundials_env.sh &&
        env &&
        cd packages/scikits-odes-sundials &&
        tox
      env:
        TOXENV: ${{ matrix.tox-env }}

  tests-win-mac:
    name: tests (${{ matrix.python-version }}, ${{matrix.sundials-version}}, ${{ matrix.os }}, double, 32)
    runs-on: ${{ matrix.os }}

    strategy:
      fail-fast: false
      matrix:
        os: [windows-latest, macos-latest, macos-13]
        python-version: ["3.9", "3.13"]
        sundials-version: ["7.1.1"]
        include:
          - python-version: "3.9"
            tox-env: py39
          - python-version: "3.13"
            tox-env: py313
        
    defaults:
      run:
        shell: bash -l {0}

    steps:
      - name: Checkout repository
        uses: actions/checkout@v4

      - name: Setup conda/python
        uses: conda-incubator/setup-miniconda@v3
        with:
          auto-update-conda: true
          miniconda-version: latest
          activate-environment: odes
          python-version: ${{ matrix.python-version }}

      - name: Setup SUNDIALS
        run: conda install sundials=${{ matrix.sundials-version }} -c conda-forge

      - name: Verify environment
        run: |
          conda info
          conda list

      - name: Set SUNDIALS installation path
        run: |
          if [[ "$RUNNER_OS" == "Windows" ]]; then
            SUNDIALS_INST="$CONDA_PREFIX\Library"
          else
            SUNDIALS_INST="$CONDA_PREFIX"
          fi

          echo "SUNDIALS_INST is set to: $SUNDIALS_INST"
          echo "SUNDIALS_INST=$SUNDIALS_INST" >> $GITHUB_ENV

      - name: Install python dependencies
        run: |
          python -m pip install --upgrade pip
          python -m pip install --upgrade setuptools
          python -m pip install --upgrade tox

      - name: List info
        run: |
          conda info
          conda list
                
      - name: Run tests
        working-directory: packages/scikits-odes-sundials
        run: tox || tox --recreate
        env:
          TOXENV: ${{ matrix.tox-env }}