NAMESPACE

# Generated by roxygen2: do not edit by hand

S3method(plot,haploAccum)
S3method(plot,ordinDNA)
S3method(plot,slidWin)
export(bestCloseMatch)
export(blockAlignment)
export(cgraph)
export(chaoHaplo)
export(checkDNA)
export(dataStat)
export(haploAccum)
export(heatmapSpp)
export(is.ambig)
export(localMinima)
export(maxInDist)
export(minInDist)
export(monophyly)
export(monophylyBoot)
export(nearNeighbour)
export(nonConDist)
export(nucDiag)
export(ordinDNA)
export(paa)
export(polyBalance)
export(rankSlidWin)
export(read.BOLD)
export(read.GB)
export(rmSingletons)
export(rnucDiag)
export(rosenberg)
export(search.BOLD)
export(seeBarcode)
export(seqStat)
export(slideAnalyses)
export(slideBoxplots)
export(slideNucDiag)
export(slidingWindow)
export(sppDist)
export(sppDistMatrix)
export(stats.BOLD)
export(tajima.K)
export(tclust)
export(threshID)
export(threshOpt)
export(tiporder)
export(titv)
export(tree.comp)
importFrom(ape,as.DNAbin)
importFrom(ape,boot.phylo)
importFrom(ape,di2multi)
importFrom(ape,dist.dna)
importFrom(ape,ladderize)
importFrom(ape,nj)
importFrom(ape,node.depth)
importFrom(ape,prop.part)
importFrom(ape,root)
importFrom(ape,rtree)
importFrom(ape,seg.sites)
importFrom(ape,unroot)
importFrom(ape,write.dna)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,boxplot)
importFrom(graphics,bxp)
importFrom(graphics,hist)
importFrom(graphics,image)
importFrom(graphics,layout)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,matlines)
importFrom(graphics,matplot)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,polygon)
importFrom(graphics,segments)
importFrom(graphics,symbols)
importFrom(graphics,text)
importFrom(pegas,haplotype)
importFrom(stats,aggregate)
importFrom(stats,cmdscale)
importFrom(stats,density)
importFrom(stats,dist)
importFrom(stats,median)
importFrom(stats,sd)
importFrom(utils,as.roman)
importFrom(utils,combn)
importFrom(utils,head)