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Hi @prete, thank you for this tool, it works well for newer files (at least for version 6.2.1) but fails on older (at least on v5.1.0), for example this nfs/cellgeni/pasham/code/cloupe/data/labelled_cloupe_upload/bayanne_cloupe_upload/WS_D_SKNsp10264999_PL.cloupe (or any in same folder):
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TypeError Traceback (most recent call last)
Cell In[67], line 2
1 file_path = '/nfs/cellgeni/pasham/code/cloupe/data/labelled_cloupe_upload/bayanne_cloupe_upload/WS_D_SKNsp10264999_PL.cloupe'
----> 2 cloupe = Cloupe(file_path)
Cell In[4], line 28, in Cloupe.__init__(self, cloupe_path)
25 for run in self.index_block.get("Runs", []):
26 if "Metadata" in run:
27 run["Metadata"] = self.read_block(
---> 28 start=run["Metadata"]["Start"],
29 end=run["Metadata"]["End"],
30 as_json=True,
31 )
32 self.runs.append(run)
34 # read Metrics
TypeError: 'NoneType' object is not subscriptable
The text was updated successfully, but these errors were encountered:
Hi @prete, thank you for this tool, it works well for newer files (at least for version 6.2.1) but fails on older (at least on v5.1.0), for example this
nfs/cellgeni/pasham/code/cloupe/data/labelled_cloupe_upload/bayanne_cloupe_upload/WS_D_SKNsp10264999_PL.cloupe
(or any in same folder):The text was updated successfully, but these errors were encountered: