From dcbf47f21e2250d780bfc9a561d4a2b327e19942 Mon Sep 17 00:00:00 2001 From: Bhal Agashe Date: Tue, 1 Dec 2020 19:25:33 +0000 Subject: [PATCH 1/4] Update MakeRelease.html --- docs/MakeRelease.html | 9 +++------ 1 file changed, 3 insertions(+), 6 deletions(-) diff --git a/docs/MakeRelease.html b/docs/MakeRelease.html index fa8029a9..5b149a88 100644 --- a/docs/MakeRelease.html +++ b/docs/MakeRelease.html @@ -29,17 +29,14 @@

Creating a new release

  • In shasta/.github/workflows/Build.yml, change BUILD_ID to Shasta Release X.Y.Z -in all cmake commands (5 instances at the time of last update of this documentation). +in all cmake commands (3 instances at the time of last update of this documentation).
  • Commit and push this change to trigger a new build on GitHub Actions. Wait for that build to complete. -
  • Download the 6 artifacts. Unzip them and rename them to the following: +
  • Download the 3 artifacts. Unzip them and rename them to the following:
  • Build Shasta for 64-bit ARM (aarch64). Github Actions currently don't support aarch64 containers. So the easiest way to do this is on a Graviton2 ec2 instance in AWS. On an aarch64 instance running Ubuntu 20.04 LTS, do the following: From 03ed2766e4788ec8a190bb49f93b5e3c8536e282 Mon Sep 17 00:00:00 2001 From: Bhal Agashe Date: Tue, 1 Dec 2020 19:35:08 +0000 Subject: [PATCH 2/4] `fastmod -m -d . --extensions html,yml '0\.6\.0' '0.7.0'` --- docs/QuickStart.html | 12 ++++++------ docs/Running.html | 6 +++--- 2 files changed, 9 insertions(+), 9 deletions(-) diff --git a/docs/QuickStart.html b/docs/QuickStart.html index 8aebc315..93de0803 100644 --- a/docs/QuickStart.html +++ b/docs/QuickStart.html @@ -21,13 +21,13 @@

    Linux

    You can use the following commands to download the executable from the latest release and run an assembly: 
     # Download the executable for the latest release.
-curl -O -L https://github.com/chanzuckerberg/shasta/releases/download/0.6.0/shasta-Linux-0.6.0
+curl -O -L https://github.com/chanzuckerberg/shasta/releases/download/0.7.0/shasta-Linux-0.7.0
 
 # Grant necessary permissions.
-chmod ugo+x shasta-Linux-0.6.0
+chmod ugo+x shasta-Linux-0.7.0
 
 # Run an assembly.
-./shasta-Linux-0.6.0 --input input.fasta
+./shasta-Linux-0.7.0 --input input.fasta

    @@ -67,13 +67,13 @@

    macOS

     # Download the executable for the latest release.
-curl -O -L https://github.com/chanzuckerberg/shasta/releases/download/0.6.0/shasta-macOS-0.6.0
+curl -O -L https://github.com/chanzuckerberg/shasta/releases/download/0.7.0/shasta-macOS-0.7.0
 
 # Grant necessary permissions.
-chmod ugo+x shasta-macOS-0.6.0
+chmod ugo+x shasta-macOS-0.7.0
 
 # Run an assembly.
-./shasta-macOS-0.6.0 --input input.fasta
+./shasta-macOS-0.7.0 --input input.fasta
    The macOS executable has been tested on macOS 10.15 (Catalina) and macOS 10.14 (Mojave). diff --git a/docs/Running.html b/docs/Running.html index fc4fc5cb..d69a317f 100644 --- a/docs/Running.html +++ b/docs/Running.html @@ -188,7 +188,7 @@

    Running with less than optimal memory

    there is one core for each virtual processor.
  • A Shasta executable for ARM is currenly not available with any Shasta release but can be built from source. -It will be first available with Shasta Release 0.6.0. +It will be first available with Shasta Release 0.7.0. @@ -650,10 +650,10 @@

    Running an assembly using Docker

    Dealing with errors