forked from hadley/adv-r
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Evaluation.Rmd
1060 lines (760 loc) · 37.4 KB
/
Evaluation.Rmd
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
876
877
878
879
880
881
882
883
884
885
886
887
888
889
890
891
892
893
894
895
896
897
898
899
900
901
902
903
904
905
906
907
908
909
910
911
912
913
914
915
916
917
918
919
920
921
922
923
924
925
926
927
928
929
930
931
932
933
934
935
936
937
938
939
940
941
942
943
944
945
946
947
948
949
950
951
952
953
954
955
956
957
958
959
960
961
962
963
964
965
966
967
968
969
970
971
972
973
974
975
976
977
978
979
980
981
982
983
984
985
986
987
988
989
990
991
992
993
994
995
996
997
998
999
1000
# Evaluation
```{r, include = FALSE}
source("common.R")
```
## Introduction
The user-facing inverse of quotation is unquotation: it gives the _user_ the ability to selectively evaluate parts of an otherwise quoted argument. The developer-facing complement of quotation is evaluation: this gives the _developer_ the ability to evaluate quoted expressions in custom environments to achieve specific goals.
This chapter begins with a discussion of evaluation in its purest form. You'll learn how `eval()` evaluates an expression in an environment, and then how it can be used to implement a number of important base R functions. Once you have the basics under your belt, you'll learn extensions to evaluation that are needed for robustness. There are two big new ideas:
* The quosure: a data structure that captures an expression along with its
associated environment, as found in function arguments.
* The data mask, which makes it easier to evaluate an expression in the
context of a data frame. This introduces potential evaluation ambiguity
which we'll then resolve with data pronouns.
Together, quasiquotation, quosures, and data masks form what we call __tidy evaluation__, or tidy eval for short. Tidy eval provides a principled approach to non-standard evaluation that makes it possible to use such functions both interactively and embedded with other functions. Tidy evaluation is the most important practical implication of all this theory so we'll spend a little time exploring the implications. The chapter finishes off with a discussion of the closest related approaches in base R, and how you can program around their drawbacks.
### Outline {-}
* Section \@ref(eval) discusses the basics of evaluation using `eval()`,
and shows how you can use it to implement key functions like `local()`
and `source()`.
* Section \@ref(quosures) introduces a new data structure, the quosure, which
combines an expression with an environment. You'll learn how to capture
quosures from promises, and evaluate them using `rlang::eval_tidy()`.
* Section \@ref(data-masks) extends evaluation with the data mask, which
makes it trivial to intermingle symbols bound in an environment with
variables found in a data frame.
* Section \@ref(tidy-evaluation) shows how to use tidy evaluation in practice,
focussing on the common pattern of quoting and unquoting, and how to
handle ambiguity with pronouns.
* Section \@ref(base-evaluation) circles back to evaluation in base R,
discusses some of the downsides, and shows how to use quasiquotation and
evaluation to wrap functions that use NSE.
### Prerequisites {-}
You'll need to be familiar with the content of Chapter \@ref(expressions) and Chapter \@ref(quasiquotation), as well as the environment data structure (Section \@ref(env-basics)) and the caller environment (Section \@ref(call-stack)).
We'll continue to use [rlang](https://rlang.r-lib.org) and [purrr](https://purrr.tidyverse.org).
```{r setup, message = FALSE}
library(rlang)
library(purrr)
```
## Evaluation basics {#eval}
\index{evaluation!basics}
\indexc{eval\_bare()}
Here we'll explore the details of `eval()` which we briefly mentioned in the last chapter. It has two key arguments: `expr` and `envir`. The first argument, `expr`, is the object to evaluate, typically a symbol or expression[^non-expr]. None of the evaluation functions quote their inputs, so you'll usually use them with `expr()` or similar:
[^non-expr]: All other objects yield themselves when evaluated; i.e. `eval(x)` yields `x`, except when `x` is a symbol or expression.
```{r}
x <- 10
eval(expr(x))
y <- 2
eval(expr(x + y))
```
The second argument, `env`, gives the environment in which the expression should be evaluated, i.e. where to look for the values of `x`, `y`, and `+`. By default, this is the current environment, i.e. the calling environment of `eval()`, but you can override it if you want:
```{r}
eval(expr(x + y), env(x = 1000))
```
The first argument is evaluated, not quoted, which can lead to confusing results once if you use a custom environment and forget to manually quote:
```{r}
eval(print(x + 1), env(x = 1000))
eval(expr(print(x + 1)), env(x = 1000))
```
Now that you've seen the basics, let's explore some applications. We'll focus primarily on base R functions that you might have used before, reimplementing the underlying principles using rlang.
### Application: `local()`
\indexc{local()}
Sometimes you want to perform a chunk of calculation that creates some intermediate variables. The intermediate variables have no long-term use and could be quite large, so you'd rather not keep them around. One approach is to clean up after yourself using `rm()`; another is to wrap the code in a function and just call it once. A more elegant approach is to use `local()`:
```{r, error = TRUE}
# Clean up variables created earlier
rm(x, y)
foo <- local({
x <- 10
y <- 200
x + y
})
foo
x
y
```
The essence of `local()` is quite simple and re-implemented below. We capture the input expression, and create a new environment in which to evaluate it. This is a new environment (so assignment doesn't affect the existing environment) with the caller environment as parent (so that `expr` can still access variables in that environment). This effectively emulates running `expr` as if it was inside a function (i.e. it's lexically scoped, Section \@ref(lexical-scoping)).
```{r, error = TRUE}
local2 <- function(expr) {
env <- env(caller_env())
eval(enexpr(expr), env)
}
foo <- local2({
x <- 10
y <- 200
x + y
})
foo
x
y
```
Understanding how `base::local()` works is harder, as it uses `eval()` and `substitute()` together in rather complicated ways. Figuring out exactly what's going on is good practice if you really want to understand the subtleties of `substitute()` and the base `eval()` functions, so they are included in the exercises below.
### Application: `source()`
\indexc{source()}
We can create a simple version of `source()` by combining `eval()` with `parse_expr()` from Section \@ref(parsing). We read in the file from disk, use `parse_expr()` to parse the string into a list of expressions, and then use `eval()` to evaluate each element in turn. This version evaluates the code in the caller environment, and invisibly returns the result of the last expression in the file just like `base::source()`.
```{r}
source2 <- function(path, env = caller_env()) {
file <- paste(readLines(path, warn = FALSE), collapse = "\n")
exprs <- parse_exprs(file)
res <- NULL
for (i in seq_along(exprs)) {
res <- eval(exprs[[i]], env)
}
invisible(res)
}
```
The real `source()` is considerably more complicated because it can `echo` input and output, and has many other settings that control its behaviour.
::: sidebar
**Expression vectors**
\index{expression vectors}
`base::eval()` has special behaviour for expression _vectors_, evaluating each component in turn. This makes for a very compact implementation of `source2()` because `base::parse()` also returns an expression object:
```{r}
source3 <- function(file, env = parent.frame()) {
lines <- parse(file)
res <- eval(lines, envir = env)
invisible(res)
}
```
While `source3()` is considerably more concise than `source2()`, this is the only advantage to expression vectors. Overall I don't believe this benefit outweighs the cost of introducing a new data structure, and hence this book avoids the use of expression vectors.
:::
### Gotcha: `function()`
\index{evaluation!functions}
\indexc{srcref}
There's one small gotcha that you should be aware of if you're using `eval()` and `expr()` to generate functions:
```{r}
x <- 10
y <- 20
f <- eval(expr(function(x, y) !!x + !!y))
f
```
This function doesn't look like it will work, but it does:
```{r}
f()
```
This is because, if available, functions print their `srcref` attribute (Section \@ref(fun-components)), and because `srcref` is a base R feature it's unaware of quasiquotation.
To work around this problem, either use `new_function()` (Section \@ref(new-function)) or remove the `srcref` attribute:
```{r}
attr(f, "srcref") <- NULL
f
```
### Exercises
1. Carefully read the documentation for `source()`. What environment does it
use by default? What if you supply `local = TRUE`? How do you provide
a custom environment?
1. Predict the results of the following lines of code:
```{r, eval = FALSE}
eval(expr(eval(expr(eval(expr(2 + 2))))))
eval(eval(expr(eval(expr(eval(expr(2 + 2)))))))
expr(eval(expr(eval(expr(eval(expr(2 + 2)))))))
```
1. Fill in the function bodies below to re-implement `get()` using `sym()`
and `eval()`, and`assign()` using `sym()`, `expr()`, and `eval()`. Don't
worry about the multiple ways of choosing an environment that `get()` and
`assign()` support; assume that the user supplies it explicitly.
```{r}
# name is a string
get2 <- function(name, env) {}
assign2 <- function(name, value, env) {}
```
1. Modify `source2()` so it returns the result of _every_ expression,
not just the last one. Can you eliminate the for loop?
1. We can make `base::local()` slightly easier to understand by spreading
out over multiple lines:
```{r}
local3 <- function(expr, envir = new.env()) {
call <- substitute(eval(quote(expr), envir))
eval(call, envir = parent.frame())
}
```
Explain how `local()` works in words. (Hint: you might want to `print(call)`
to help understand what `substitute()` is doing, and read the documentation
to remind yourself what environment `new.env()` will inherit from.)
## Quosures
\index{quosures}
Almost every use of `eval()` involves both an expression and environment. This coupling is so important that we need a data structure that can hold both pieces. Base R does not have such a structure[^formula] so rlang fills the gap with the __quosure__, an object that contains an expression and an environment. The name is a portmanteau of quoting and closure, because a quosure both quotes the expression and encloses the environment. Quosures reify the internal promise object (Section \@ref(promises)) into something that you can program with.
[^formula]: Technically a formula combines an expression and environment, but formulas are tightly coupled to modelling so a new data structure makes sense.
In this section, you'll learn how to create and manipulate quosures, and a little about how they are implemented.
### Creating
\index{quosures!creating}
There are three ways to create quosures:
* Use `enquo()` and `enquos()` to capture user-supplied expressions.
The vast majority of quosures should be created this way.
```{r}
foo <- function(x) enquo(x)
foo(a + b)
```
\indexc{enquo()}
* `quo()` and `quos()` exist to match to `expr()` and `exprs()`, but
they are included only for the sake of completeness and are needed very
rarely. If you find yourself using them, think carefully if `expr()` and
careful unquoting can eliminate the need to capture the environment.
```{r}
quo(x + y + z)
```
\index{quosures!quo()@\texttt{quo()}}
* `new_quosure()` create a quosure from its components: an expression and
an environment. This is rarely needed in practice, but is useful for
learning, so is used a lot in this chapter.
```{r}
new_quosure(expr(x + y), env(x = 1, y = 10))
```
### Evaluating
\index{evaluation!tidy}
\index{quosures!evaluating}
\indexc{eval\_tidy()}
Quosures are paired with a new evaluation function `eval_tidy()` that takes a single quosure instead of an expression-environment pair. It is straightforward to use:
```{r}
q1 <- new_quosure(expr(x + y), env(x = 1, y = 10))
eval_tidy(q1)
```
For this simple case, `eval_tidy(q1)` is basically a shortcut for `eval(get_expr(q1), get_env(q1))`. However, it has two important features that you'll learn about later in the chapter: it supports nested quosures (Section \@ref(nested-quosures)) and pronouns (Section \@ref(pronouns)).
### Dots {#quosure-dots}
\indexc{...}
Quosures are typically just a convenience: they make code cleaner because you only have one object to pass around, instead of two. They are, however, essential when it comes to working with `...` because it's possible for each argument passed to `...` to be associated with a different environment. In the following example note that both quosures have the same expression, `x`, but a different environment:
```{r}
f <- function(...) {
x <- 1
g(..., f = x)
}
g <- function(...) {
enquos(...)
}
x <- 0
qs <- f(global = x)
qs
```
That means that when you evaluate them, you get the correct results:
```{r}
map_dbl(qs, eval_tidy)
```
Correctly evaluating the elements of `...` was one of the original motivations for the development of quosures.
### Under the hood {#quosure-impl}
\index{quosures!internals}
\index{formulas}
Quosures were inspired by R's formulas, because formulas capture an expression and an environment:
```{r}
f <- ~runif(3)
str(f)
```
An early version of tidy evaluation used formulas instead of quosures, as an attractive feature of `~` is that it provides quoting with a single keystroke. Unfortunately, however, there is no clean way to make `~` a quasiquoting function.
Quosures are a subclass of formulas:
```{r}
q4 <- new_quosure(expr(x + y + z))
class(q4)
```
which means that under the hood, quosures, like formulas, are call objects:
```{r}
is_call(q4)
q4[[1]]
q4[[2]]
```
with an attribute that stores the environment:
```{r}
attr(q4, ".Environment")
```
If you need to extract the expression or environment, don't rely on these implementation details. Instead use `get_expr()` and `get_env()`:
```{r}
get_expr(q4)
get_env(q4)
```
### Nested quosures
\index{quosures!nested}
It's possible to use quasiquotation to embed a quosure in an expression. This is an advanced tool, and most of the time you don't need to think about it because it just works, but I talk about it here so you can spot nested quosures in the wild and not be confused. Take this example, which inlines two quosures into an expression:
```{r}
q2 <- new_quosure(expr(x), env(x = 1))
q3 <- new_quosure(expr(x), env(x = 10))
x <- expr(!!q2 + !!q3)
```
It evaluates correctly with `eval_tidy()`:
```{r}
eval_tidy(x)
```
However, if you print it, you only see the `x`s, with their formula heritage leaking through:
```{r}
x
```
You can get a better display with `rlang::expr_print()` (Section \@ref(non-standard-ast)):
```{r}
expr_print(x)
```
When you use `expr_print()` in the console, quosures are coloured according to their environment, making it easier to spot when symbols are bound to different variables.
### Exercises
1. Predict what each of the following quosures will return if
evaluated.
```{r}
q1 <- new_quosure(expr(x), env(x = 1))
q1
q2 <- new_quosure(expr(x + !!q1), env(x = 10))
q2
q3 <- new_quosure(expr(x + !!q2), env(x = 100))
q3
```
1. Write an `enenv()` function that captures the environment associated
with an argument. (Hint: this should only require two function calls.)
## Data masks
\index{data masks}
In this section, you'll learn about the __data mask__, a data frame where the evaluated code will look first for variable definitions. The data mask is the key idea that powers base functions like `with()`, `subset()` and `transform()`, and is used throughout the tidyverse in packages like dplyr and ggplot2.
### Basics
\indexc{eval\_tidy()}
The data mask allows you to mingle variables from an environment and a data frame in a single expression. You supply the data mask as the second argument to `eval_tidy()`:
```{r}
q1 <- new_quosure(expr(x * y), env(x = 100))
df <- data.frame(y = 1:10)
eval_tidy(q1, df)
```
This code is a little hard to follow because there's so much syntax as we're creating every object from scratch. It's easier to see what's going on if we make a little wrapper. I call this `with2()` because it's equivalent to `base::with()`.
\indexc{with()}
```{r}
with2 <- function(data, expr) {
expr <- enquo(expr)
eval_tidy(expr, data)
}
```
We can now rewrite the code above as below:
```{r}
x <- 100
with2(df, x * y)
```
`base::eval()` has similar functionality, although it doesn't call it a data mask. Instead you can supply a data frame to the second argument and an environment to the third. That gives the following implementation of `with()`:
```{r}
with3 <- function(data, expr) {
expr <- substitute(expr)
eval(expr, data, caller_env())
}
```
### Pronouns
\index{pronouns}
\index{.Data@\texttt{.data}}
\index{.Env@\texttt{.env}}
Using a data mask introduces ambiguity. For example, in the following code you can't know whether `x` will come from the data mask or the environment, unless you know what variables are found in `df`.
```{r, eval = FALSE}
with2(df, x)
```
That makes code harder to reason about (because you need to know more context), which can introduce bugs. To resolve that issue, the data mask provides two pronouns: `.data` and `.env`.
* `.data$x` always refers to `x` in the data mask.
* `.env$x` always refers to `x` in the environment.
```{r}
x <- 1
df <- data.frame(x = 2)
with2(df, .data$x)
with2(df, .env$x)
```
You can also subset `.data` and `.env` using `[[`, e.g. `.data[["x"]]`. Otherwise the pronouns are special objects and you shouldn't expect them to behave like data frames or environments. In particular, they throw an error if the object isn't found:
```{r, error = TRUE}
with2(df, .data$y)
```
### Application: `subset()` {#subset}
\indexc{subset()}
\indexc{filter()}
We'll explore tidy evaluation in the context of `base::subset()`, because it's a simple yet powerful function that makes a common data manipulation challenge easier. If you haven't used it before, `subset()`, like `dplyr::filter()`, provides a convenient way of selecting rows of a data frame. You give it some data, along with an expression that is evaluated in the context of that data. This considerably reduces the number of times you need to type the name of the data frame:
```{r}
sample_df <- data.frame(a = 1:5, b = 5:1, c = c(5, 3, 1, 4, 1))
# Shorthand for sample_df[sample_df$a >= 4, ]
subset(sample_df, a >= 4)
# Shorthand for sample_df[sample_df$b == sample_df$c, ]
subset(sample_df, b == c)
```
The core of our version of `subset()`, `subset2()`, is quite simple. It takes two arguments: a data frame, `data`, and an expression, `rows`. We evaluate `rows` using `df` as a data mask, then use the results to subset the data frame with `[`. I've included a very simple check to ensure the result is a logical vector; real code would do more to create an informative error.
```{r}
subset2 <- function(data, rows) {
rows <- enquo(rows)
rows_val <- eval_tidy(rows, data)
stopifnot(is.logical(rows_val))
data[rows_val, , drop = FALSE]
}
subset2(sample_df, b == c)
```
### Application: transform
\indexc{transform()}
A more complicated situation is `base::transform()` which allows you to add new variables to a data frame, evaluating their expressions in the context of the existing variables:
```{r}
df <- data.frame(x = c(2, 3, 1), y = runif(3))
transform(df, x = -x, y2 = 2 * y)
```
Again, our own `transform2()` requires little code. We capture the unevaluated `...` with `enquos(...)`, and then evaluate each expression using a for loop. Real code would do more error checking to ensure that each input is named and evaluates to a vector the same length as `data`.
```{r}
transform2 <- function(.data, ...) {
dots <- enquos(...)
for (i in seq_along(dots)) {
name <- names(dots)[[i]]
dot <- dots[[i]]
.data[[name]] <- eval_tidy(dot, .data)
}
.data
}
transform2(df, x2 = x * 2, y = -y)
```
NB: I named the first argument `.data` to avoid problems if users tried to create a variable called `data`. They will still have problems if they attempt to create a variable called `.data`, but this is much less likely. This is the same reasoning that leads to the `.x` and `.f` arguments to `map()` (Section \@ref(argument-names)).
### Application: `select()` {#select}
\indexc{select()}
A data mask will typically be a data frame, but it's sometimes useful to provide a list filled with more exotic contents. This is basically how the `select` argument in `base::subset()` works. It allows you to refer to variables as if they were numbers:
```{r}
df <- data.frame(a = 1, b = 2, c = 3, d = 4, e = 5)
subset(df, select = b:d)
```
The key idea is to create a named list where each component gives the position of the corresponding variable:
```{r}
vars <- as.list(set_names(seq_along(df), names(df)))
str(vars)
```
Then implementation is again only a few lines of code:
```{r}
select2 <- function(data, ...) {
dots <- enquos(...)
vars <- as.list(set_names(seq_along(data), names(data)))
cols <- unlist(map(dots, eval_tidy, vars))
data[, cols, drop = FALSE]
}
select2(df, b:d)
```
`dplyr::select()` takes this idea and runs with it, providing a number of helpers that allow you to select variables based on their names (e.g. `starts_with("x")` or `ends_with("_a"`)).
### Exercises
1. Why did I use a for loop in `transform2()` instead of `map()`?
Consider `transform2(df, x = x * 2, x = x * 2)`.
1. Here's an alternative implementation of `subset2()`:
```{r, results = FALSE}
subset3 <- function(data, rows) {
rows <- enquo(rows)
eval_tidy(expr(data[!!rows, , drop = FALSE]), data = data)
}
df <- data.frame(x = 1:3)
subset3(df, x == 1)
```
Compare and contrast `subset3()` to `subset2()`. What are its advantages
and disadvantages?
1. The following function implements the basics of `dplyr::arrange()`.
Annotate each line with a comment explaining what it does. Can you
explain why `!!.na.last` is strictly correct, but omitting the `!!`
is unlikely to cause problems?
```{r}
arrange2 <- function(.df, ..., .na.last = TRUE) {
args <- enquos(...)
order_call <- expr(order(!!!args, na.last = !!.na.last))
ord <- eval_tidy(order_call, .df)
stopifnot(length(ord) == nrow(.df))
.df[ord, , drop = FALSE]
}
```
## Using tidy evaluation {#tidy-evaluation}
While it's important to understand how `eval_tidy()` works, most of the time you won't call it directly. Instead, you'll usually use it indirectly by calling a function that uses `eval_tidy()`. This section will give a few practical examples of wrapping functions that use tidy evaluation.
### Quoting and unquoting
\index{quoting!in practice}
\index{unquoting!in practice}
\index{bootstrapping}
```{r, include = FALSE}
rm(x)
```
Imagine we have written a function that resamples a dataset:
```{r}
resample <- function(df, n) {
idx <- sample(nrow(df), n, replace = TRUE)
df[idx, , drop = FALSE]
}
```
We want to create a new function that allows us to resample and subset in a single step. Our naive approach doesn't work:
```{r, error = TRUE}
subsample <- function(df, cond, n = nrow(df)) {
df <- subset2(df, cond)
resample(df, n)
}
df <- data.frame(x = c(1, 1, 1, 2, 2), y = 1:5)
subsample(df, x == 1)
```
`subsample()` doesn't quote any arguments so `cond` is evaluated normally (not in a data mask), and we get an error when it tries to find a binding for `x`. To fix this problem we need to quote `cond`, and then unquote it when we pass it on ot `subset2()`:
```{r}
subsample <- function(df, cond, n = nrow(df)) {
cond <- enquo(cond)
df <- subset2(df, !!cond)
resample(df, n)
}
subsample(df, x == 1)
```
This is a very common pattern; whenever you call a quoting function with arguments from the user, you need to quote them and then unquote.
<!-- GVW: I really, really want a diagram here to show the various objects in play at each step - it took me a long time to figure out why quote/unquote was needed, and I still have to go back and review it each time I run into it. -->
### Handling ambiguity
\index{pronouns}
In the case above, we needed to think about tidy evaluation because of quasiquotation. We also need to think about tidy evaluation even when the wrapper doesn't need to quote any arguments. Take this wrapper around `subset2()`:
```{r}
threshold_x <- function(df, val) {
subset2(df, x >= val)
}
```
This function can silently return an incorrect result in two situations:
* When `x` exists in the calling environment, but not in `df`:
```{r}
x <- 10
no_x <- data.frame(y = 1:3)
threshold_x(no_x, 2)
```
* When `val` exists in `df`:
```{r}
has_val <- data.frame(x = 1:3, val = 9:11)
threshold_x(has_val, 2)
```
These failure modes arise because tidy evaluation is ambiguous: each variable can be found in __either__ the data mask __or__ the environment. To make this function safe we need to remove the ambiguity using the `.data` and `.env` pronouns:
```{r, error = TRUE}
threshold_x <- function(df, val) {
subset2(df, .data$x >= .env$val)
}
x <- 10
threshold_x(no_x, 2)
threshold_x(has_val, 2)
```
Generally, whenever you use the `.env` pronoun, you can use unquoting instead:
```{r}
threshold_x <- function(df, val) {
subset2(df, .data$x >= !!val)
}
```
There are subtle differences in when `val` is evaluated. If you unquote, `val` will be early evaluated by `enquo()`; if you use a pronoun, `val` will be lazily evaluated by `eval_tidy()`. These differences are usually unimportant, so pick the form that looks most natural.
### Quoting and ambiguity
To finish our discussion let's consider the case where we have both quoting and potential ambiguity. I'll generalise `threshold_x()` slightly so that the user can pick the variable used for thresholding. Here I used `.data[[var]]` because it makes the code a little simpler; in the exercises you'll have a chance to explore how you might use `$` instead.
```{r}
threshold_var <- function(df, var, val) {
var <- as_string(ensym(var))
subset2(df, .data[[var]] >= !!val)
}
df <- data.frame(x = 1:10)
threshold_var(df, x, 8)
```
It is not always the responsibility of the function author to avoid ambiguity. Imagine we generalise further to allow thresholding based on any expression:
```{r}
threshold_expr <- function(df, expr, val) {
expr <- enquo(expr)
subset2(df, !!expr >= !!val)
}
```
It's not possible to evaluate `expr` only in the data mask, because the data mask doesn't include any functions like `+` or `==`. Here, it's the user's responsibility to avoid ambiguity. As a general rule of thumb, as a function author it's your responsibility to avoid ambiguity with any expressions that you create; it's the user's responsibility to avoid ambiguity in expressions that they create.
### Exercises
1. I've included an alternative implementation of `threshold_var()` below.
What makes it different to the approach I used above? What makes it harder?
```{r}
threshold_var <- function(df, var, val) {
var <- ensym(var)
subset2(df, `$`(.data, !!var) >= !!val)
}
```
## Base evaluation
\index{evaluation!base R}
Now that you understand tidy evaluation, it's time to come back to the alternative approaches taken by base R. Here I'll explore the two most common uses in base R:
* `substitute()` and evaluation in the caller environment, as used by
`subset()`. I'll use this technique to demonstrate why this technique is not
programming friendly, as warned about in the `subset()` documentation.
* `match.call()`, call manipulation, and evaluation in the caller environment,
as used by `write.csv()` and `lm()`. I'll use this technique to demonstrate how
quasiquotation and (regular) evaluation can help you write wrappers around
such functions.
These two approaches are common forms of non-standard evaluation (NSE).
### `substitute()`
\indexc{substitute()}
The most common form of NSE in base R is `substitute()` + `eval()`. The following code shows how you might write the core of `subset()` in this style using `substitute()` and `eval()` rather than `enquo()` and `eval_tidy()`. I repeat the code introduced in Section \@ref(subset) so you can compare easily. The main difference is the evaluation environment: in `subset_base()` the argument is evaluated in the caller environment, while in `subset_tidy()`, it's evaluated in the environment where it was defined.
```{r}
subset_base <- function(data, rows) {
rows <- substitute(rows)
rows_val <- eval(rows, data, caller_env())
stopifnot(is.logical(rows_val))
data[rows_val, , drop = FALSE]
}
subset_tidy <- function(data, rows) {
rows <- enquo(rows)
rows_val <- eval_tidy(rows, data)
stopifnot(is.logical(rows_val))
data[rows_val, , drop = FALSE]
}
```
#### Programming with `subset()`
\indexc{subset()}
The documentation of `subset()` includes the following warning:
> This is a convenience function intended for use interactively. For
> programming it is better to use the standard subsetting functions like `[`,
> and in particular the non-standard evaluation of argument `subset` can have
> unanticipated consequences.
There are three main problems:
* `base::subset()` always evaluates `rows` in the calling environment, but
if `...` has been used, then the expression might need to be evaluated
elsewhere:
```{r}
f1 <- function(df, ...) {
xval <- 3
subset_base(df, ...)
}
my_df <- data.frame(x = 1:3, y = 3:1)
xval <- 1
f1(my_df, x == xval)
```
This may seems like an esoteric concern, but it means that `subset_base()`
cannot reliably work with functionals like `map()` or `lapply()`:
```{r, error = TRUE}
local({
zzz <- 2
dfs <- list(data.frame(x = 1:3), data.frame(x = 4:6))
lapply(dfs, subset_base, x == zzz)
})
```
* Calling `subset()` from another function requires some care: you have
to use `substitute()` to capture a call to `subset()` complete expression,
and then evaluate. I think this code is hard to understand because
`substitute()` doesn't use a syntactic marker for unquoting. Here I print
the generated call to make it a little easier to see what's happening.
```{r}
f2 <- function(df1, expr) {
call <- substitute(subset_base(df1, expr))
expr_print(call)
eval(call, caller_env())
}
my_df <- data.frame(x = 1:3, y = 3:1)
f2(my_df, x == 1)
```
* `eval()` doesn't provide any pronouns so there's no way to require part of
the expression to come from the data. As far as I can tell, there's no
way to make the following function safe except by manually checking for the
presence of `z` variable in `df`.
```{r}
f3 <- function(df) {
call <- substitute(subset_base(df, z > 0))
expr_print(call)
eval(call, caller_env())
}
my_df <- data.frame(x = 1:3, y = 3:1)
z <- -1
f3(my_df)
```
#### What about `[`?
Given that tidy evaluation is quite complex, why not simply use `[` as `?subset` recommends? Primarily, it seems unappealing to me to have functions that can only be used interactively, and never inside another function.
Additionally, even the simple `subset()` function provides two useful features compared to `[`:
* It sets `drop = FALSE` by default, so it's guaranteed to return a data frame.
* It drops rows where the condition evaluates to `NA`.
That means `subset(df, x == y)` is not equivalent to `df[x == y,]` as you might expect. Instead, it is equivalent to `df[x == y & !is.na(x == y), , drop = FALSE]`: that's a lot more typing! Real-life alternatives to `subset()`, like `dplyr::filter()`, do even more. For example, `dplyr::filter()` can translate R expressions to SQL so that they can be executed in a database. This makes programming with `filter()` relatively more important.
### `match.call()`
\indexc{match.call()}
Another common form of NSE is to capture the complete call with `match.call()`, modify it, and evaluate the result. `match.call()` is similar to `substitute()`, but instead of capturing a single argument, it captures the complete call. It doesn't have an equivalent in rlang.
```{r}
g <- function(x, y, z) {
match.call()
}
g(1, 2, z = 3)
```
One prominent user of `match.call()` is `write.csv()`, which basically works by transforming the call into a call to `write.table()` with the appropriate arguments set. The following code shows the heart of `write.csv()`:
```{r}
write.csv <- function(...) {
call <- match.call(write.table, expand.dots = TRUE)
call[[1]] <- quote(write.table)
call$sep <- ","
call$dec <- "."
eval(call, parent.frame())
}
```
I don't think this technique is a good idea because you can achieve the same result without NSE:
```{r}
write.csv <- function(...) {
write.table(..., sep = ",", dec = ".")
}
```
Nevertheless, it's important to understand this technique because it's commonly used in modelling functions. These functions also prominently print the captured call, which poses some special challenges, as you'll see next.
#### Wrapping modelling functions
\indexc{lm()}
To begin, consider the simplest possible wrapper around `lm()`:
```{r}
lm2 <- function(formula, data) {
lm(formula, data)
}
```
This wrapper works, but is suboptimal because `lm()` captures its call and displays it when printing.
```{r}
lm2(mpg ~ disp, mtcars)
```
Fixing this is important because this call is the chief way that you see the model specification when printing the model. To overcome this problem, we need to capture the arguments, create the call to `lm()` using unquoting, then evaluate that call. To make it easier to see what's going on, I'll also print the expression we generate. This will become more useful as the calls get more complicated.
```{r}
lm3 <- function(formula, data, env = caller_env()) {
formula <- enexpr(formula)
data <- enexpr(data)
lm_call <- expr(lm(!!formula, data = !!data))
expr_print(lm_call)
eval(lm_call, env)
}
lm3(mpg ~ disp, mtcars)
```
There are three pieces that you'll use whenever wrapping a base NSE function in this way:
* You capture the unevaluated arguments using `enexpr()`, and capture the caller
environment using `caller_env()`.
* You generate a new expression using `expr()` and unquoting.
* You evaluate that expression in the caller environment. You have to accept
that the function will not work correctly if the arguments are not defined
in the caller environment. Providing the `env` argument at least provides
a hook that experts can use if the default environment isn't correct.
The use of `enexpr()` has a nice side-effect: we can use unquoting to generate formulas dynamically:
```{r}
resp <- expr(mpg)
disp1 <- expr(vs)
disp2 <- expr(wt)
lm3(!!resp ~ !!disp1 + !!disp2, mtcars)
```
#### Evaluation environment
What if you want to mingle objects supplied by the user with objects that you create in the function? For example, imagine you want to make an auto-resampling version of `lm()`. You might write it like this:
```{r, error = TRUE}
resample_lm0 <- function(formula, data, env = caller_env()) {
formula <- enexpr(formula)
resample_data <- resample(data, n = nrow(data))
lm_call <- expr(lm(!!formula, data = resample_data))
expr_print(lm_call)
eval(lm_call, env)
}
df <- data.frame(x = 1:10, y = 5 + 3 * (1:10) + round(rnorm(10), 2))
resample_lm0(y ~ x, data = df)
```
Why doesn't this code work? We're evaluating `lm_call` in the caller environment, but `resample_data` exists in the execution environment. We could instead evaluate in the execution environment of `resample_lm0()`, but there's no guarantee that `formula` could be evaluated in that environment.
There are two basic ways to overcome this challenge:
1. Unquote the data frame into the call. This means that no lookup has
to occur, but has all the problems of inlining expressions (Section
\@ref(non-standard-ast)). For modelling functions this means that the
captured call is suboptimal:
```{r, eval = FALSE}
resample_lm1 <- function(formula, data, env = caller_env()) {
formula <- enexpr(formula)
resample_data <- resample(data, n = nrow(data))