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Correlation between replicates #124

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aperreault opened this issue Dec 16, 2019 · 0 comments
Open

Correlation between replicates #124

aperreault opened this issue Dec 16, 2019 · 0 comments

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@aperreault
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Hi there!

Does cufflinks calculate the correlation between replicates provided for analysis? If not, how would you calculate this manually? Since the gene IDs or Cuff IDs do not match between replicates, it's unclear how to align these to correlation FPKM values.

I appreciate any insight!
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@aperreault