From dabd1688318dae0c36abb47280875dd4146a83d0 Mon Sep 17 00:00:00 2001 From: ndevln Date: Tue, 4 Mar 2025 11:16:24 +0100 Subject: [PATCH 1/2] Add ggsurveillance to data visualisation --- Epidemiology.md | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/Epidemiology.md b/Epidemiology.md index 13d642d..fcc61c0 100644 --- a/Epidemiology.md +++ b/Epidemiology.md @@ -104,6 +104,10 @@ and exploration of epidemiological data. estimation of daily growth rate. [RECON](https://www.repidemicsconsortium.org/) package. This package is scheduled for deprecation and is replaced by `r pkg("incidence2")`. +- `r pkg("ggsurveillance")`: Provides `ggplot2` geoms for case visualization like epicurves or epigantt charts. + Includes `tidyverse` compatible functions and `ggplot2` stats for date transformations + (e.g. binning by week or month or seasonal alignment of case data). Further includes `ggplot2` scales for + case data visualization and other helper functions (e.g. for creating age groups). ## Infectious disease modeling From eb344952502ae498459debc4406524a414639e99 Mon Sep 17 00:00:00 2001 From: Alexander Bartel Date: Tue, 4 Mar 2025 11:52:45 +0100 Subject: [PATCH 2/2] Remove trailing spaces Co-authored-by: Hugo Gruson <10783929+Bisaloo@users.noreply.github.com> --- Epidemiology.md | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) diff --git a/Epidemiology.md b/Epidemiology.md index fcc61c0..f68da56 100644 --- a/Epidemiology.md +++ b/Epidemiology.md @@ -104,9 +104,9 @@ and exploration of epidemiological data. estimation of daily growth rate. [RECON](https://www.repidemicsconsortium.org/) package. This package is scheduled for deprecation and is replaced by `r pkg("incidence2")`. -- `r pkg("ggsurveillance")`: Provides `ggplot2` geoms for case visualization like epicurves or epigantt charts. - Includes `tidyverse` compatible functions and `ggplot2` stats for date transformations - (e.g. binning by week or month or seasonal alignment of case data). Further includes `ggplot2` scales for +- `r pkg("ggsurveillance")`: Provides `ggplot2` geoms for case visualization like epicurves or epigantt charts. + Includes `tidyverse` compatible functions and `ggplot2` stats for date transformations + (e.g. binning by week or month or seasonal alignment of case data). Further includes `ggplot2` scales for case data visualization and other helper functions (e.g. for creating age groups). ## Infectious disease modeling