diff --git a/slides/04_modules.md b/slides/04_modules.md index f2a745a6..18ac5754 100644 --- a/slides/04_modules.md +++ b/slides/04_modules.md @@ -32,6 +32,7 @@ Unported License, [http://creativecommons.org/licenses/by-sa/4.0/](http://creati - You can check the available applications and their respective modules in the [application list](https://docs.csc.fi/apps/) - Each application page in Docs CSC contains information on basic usage - You can use `module spider` to search for an application + - On LUMI you need to first run `module use /appl/local/csc/modulefiles` to see modules installed by CSC - Use the software by loading the module: `module load modulename` - For example: `module load gromacs-env` @@ -55,11 +56,11 @@ Unported License, [http://creativecommons.org/licenses/by-sa/4.0/](http://creati # Various kinds of modules - Some modules contain software that have a graphical user interface - - For example, the chemistry visualization software [Molden](https://docs.csc.fi/apps/molden/) - - Use the [Puhti web interface](https://puhti.csc.fi) or [another method to open the GUI](https://docs.csc.fi/computing/connecting/#using-graphical-applications) -- Some modules contain software that provide a command-line interface - - For example, the [zstd module](https://docs.csc.fi/support/tutorials/env-guide/packing-and-compression-tools/#zstandard-compression-tool) -- A module might contain only one program (*e.g.* `gromacs-env`), while some provide a collection of applications or *e.g.* Python or R packages + - For example, the chemistry visualization software [VMD](https://docs.csc.fi/apps/vmd/) + - Use the [Puhti/Mahti web interface](https://puhti.csc.fi) or [another method to open the GUI](https://docs.csc.fi/computing/connecting/#using-graphical-applications) +- Some modules contain software that only provide a command-line interface + - For example, the [OpenBabel module](https://docs.csc.fi/apps/openbabel/) +- A module might contain only one program (*e.g.* `gromacs-env`), while some provide a collection of applications (*e.g.* Python or R packages) - For example, [Geoconda](https://docs.csc.fi/apps/geoconda/) and [Python Data](https://docs.csc.fi/apps/python-data/) # Conda, Python and R packages