diff --git a/target/docker/convert/maxquant_to_h5ad/maxquant_to_h5ad b/target/docker/convert/maxquant_to_h5ad/maxquant_to_h5ad index 933bd31..7da8cd6 100755 --- a/target/docker/convert/maxquant_to_h5ad/maxquant_to_h5ad +++ b/target/docker/convert/maxquant_to_h5ad/maxquant_to_h5ad @@ -377,9 +377,9 @@ FROM dataintuitive/randpy:r4.0_py3.8_bioc3.12 RUN : LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component convert maxquant_to_h5ad" -LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" +LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" -LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" +LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } diff --git a/target/docker/convert/maxquant_to_h5ad/viash.yaml b/target/docker/convert/maxquant_to_h5ad/viash.yaml index 69dc8ed..37daabf 100644 --- a/target/docker/convert/maxquant_to_h5ad/viash.yaml +++ b/target/docker/convert/maxquant_to_h5ad/viash.yaml @@ -421,9 +421,9 @@ functionality: RUN : LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component convert maxquant_to_h5ad" - LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" + LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" - LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" + LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } @@ -823,5 +823,5 @@ info: output: "target/docker/convert/maxquant_to_h5ad" executable: "target/docker/convert/maxquant_to_h5ad/maxquant_to_h5ad" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/docker/convert/thermo_to_mzml/thermo_to_mzml b/target/docker/convert/thermo_to_mzml/thermo_to_mzml index 9b605c2..6689820 100755 --- a/target/docker/convert/thermo_to_mzml/thermo_to_mzml +++ b/target/docker/convert/thermo_to_mzml/thermo_to_mzml @@ -388,9 +388,9 @@ rm ThermoRawFileParser.zip LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component convert thermo_to_mzml" -LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" +LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" -LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" +LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } diff --git a/target/docker/convert/thermo_to_mzml/viash.yaml b/target/docker/convert/thermo_to_mzml/viash.yaml index 7e54d9f..6bc66a2 100644 --- a/target/docker/convert/thermo_to_mzml/viash.yaml +++ b/target/docker/convert/thermo_to_mzml/viash.yaml @@ -431,9 +431,9 @@ functionality: LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component convert thermo_to_mzml" - LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" + LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" - LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" + LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } @@ -808,5 +808,5 @@ info: output: "target/docker/convert/thermo_to_mzml" executable: "target/docker/convert/thermo_to_mzml/thermo_to_mzml" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/docker/download/sync_test_resources/sync_test_resources b/target/docker/download/sync_test_resources/sync_test_resources index d0bb2df..bdb1ce5 100755 --- a/target/docker/download/sync_test_resources/sync_test_resources +++ b/target/docker/download/sync_test_resources/sync_test_resources @@ -401,9 +401,9 @@ FROM amazon/aws-cli:2.7.1 RUN : LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component download sync_test_resources" -LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" +LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" -LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" +LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } diff --git a/target/docker/download/sync_test_resources/viash.yaml b/target/docker/download/sync_test_resources/viash.yaml index f085b95..01b9e0a 100644 --- a/target/docker/download/sync_test_resources/viash.yaml +++ b/target/docker/download/sync_test_resources/viash.yaml @@ -475,9 +475,9 @@ functionality: RUN : LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component download sync_test_resources" - LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" + LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" - LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" + LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } @@ -913,5 +913,5 @@ info: output: "target/docker/download/sync_test_resources" executable: "target/docker/download/sync_test_resources/sync_test_resources" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/docker/maxquant/maxquant/maxquant b/target/docker/maxquant/maxquant/maxquant index a4a872f..e9d9f22 100755 --- a/target/docker/maxquant/maxquant/maxquant +++ b/target/docker/maxquant/maxquant/maxquant @@ -459,9 +459,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component maxquant maxquant" -LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" +LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" -LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" +LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } diff --git a/target/docker/maxquant/maxquant/viash.yaml b/target/docker/maxquant/maxquant/viash.yaml index 15ca7a7..5c1f896 100644 --- a/target/docker/maxquant/maxquant/viash.yaml +++ b/target/docker/maxquant/maxquant/viash.yaml @@ -650,9 +650,9 @@ functionality: LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component maxquant maxquant" - LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" + LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" - LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" + LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } @@ -1893,5 +1893,5 @@ info: output: "target/docker/maxquant/maxquant" executable: "target/docker/maxquant/maxquant/maxquant" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/docker/msdial/msdial_gcms/msdial_gcms b/target/docker/msdial/msdial_gcms/msdial_gcms index 6c40911..057a2f7 100755 --- a/target/docker/msdial/msdial_gcms/msdial_gcms +++ b/target/docker/msdial/msdial_gcms/msdial_gcms @@ -593,9 +593,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component msdial msdial_gcms" -LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" +LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" -LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" +LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } diff --git a/target/docker/msdial/msdial_gcms/viash.yaml b/target/docker/msdial/msdial_gcms/viash.yaml index 456fcdc..334a67b 100644 --- a/target/docker/msdial/msdial_gcms/viash.yaml +++ b/target/docker/msdial/msdial_gcms/viash.yaml @@ -1216,9 +1216,9 @@ functionality: LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component msdial msdial_gcms" - LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" + LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" - LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" + LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } @@ -2791,5 +2791,5 @@ info: output: "target/docker/msdial/msdial_gcms" executable: "target/docker/msdial/msdial_gcms/msdial_gcms" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/docker/msdial/msdial_lcms/msdial_lcms b/target/docker/msdial/msdial_lcms/msdial_lcms index 9a245f8..09dd308 100755 --- a/target/docker/msdial/msdial_lcms/msdial_lcms +++ b/target/docker/msdial/msdial_lcms/msdial_lcms @@ -757,9 +757,9 @@ RUN pip install --upgrade pip && \ LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component msdial msdial_lcms" -LABEL org.opencontainers.image.created="2022-08-09T04:29:56Z" +LABEL org.opencontainers.image.created="2022-08-09T06:25:07Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" -LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" +LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } diff --git a/target/docker/msdial/msdial_lcms/viash.yaml b/target/docker/msdial/msdial_lcms/viash.yaml index aef9d94..76ca214 100644 --- a/target/docker/msdial/msdial_lcms/viash.yaml +++ b/target/docker/msdial/msdial_lcms/viash.yaml @@ -1818,9 +1818,9 @@ functionality: LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component msdial msdial_lcms" - LABEL org.opencontainers.image.created="2022-08-09T04:29:56Z" + LABEL org.opencontainers.image.created="2022-08-09T06:25:07Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" - LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" + LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } @@ -4182,5 +4182,5 @@ info: output: "target/docker/msdial/msdial_lcms" executable: "target/docker/msdial/msdial_lcms/msdial_lcms" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/docker/qc/rawbeans/rawbeans b/target/docker/qc/rawbeans/rawbeans index 5b59512..5053564 100755 --- a/target/docker/qc/rawbeans/rawbeans +++ b/target/docker/qc/rawbeans/rawbeans @@ -401,9 +401,9 @@ python setup.py install LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component qc rawbeans" -LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" +LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" -LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" +LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } diff --git a/target/docker/qc/rawbeans/viash.yaml b/target/docker/qc/rawbeans/viash.yaml index ca60377..92b196e 100644 --- a/target/docker/qc/rawbeans/viash.yaml +++ b/target/docker/qc/rawbeans/viash.yaml @@ -466,9 +466,9 @@ functionality: LABEL org.opencontainers.image.authors="Robrecht Cannoodt (maintainer) {github: rcannood, orcid: 0000-0003-3641-729X}" LABEL org.opencontainers.image.description="Companion container for running component qc rawbeans" - LABEL org.opencontainers.image.created="2022-08-09T04:29:55Z" + LABEL org.opencontainers.image.created="2022-08-09T06:25:06Z" LABEL org.opencontainers.image.source="https://github.com/czbiohub/mspipelines" - LABEL org.opencontainers.image.revision="9082f742100901e40556dfcf72ca11092ffe09fa" + LABEL org.opencontainers.image.revision="8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" LABEL org.opencontainers.image.version="0.3.1" VIASHDOCKER } @@ -939,5 +939,5 @@ info: output: "target/docker/qc/rawbeans" executable: "target/docker/qc/rawbeans/rawbeans" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/native/download/sync_test_resources/viash.yaml b/target/native/download/sync_test_resources/viash.yaml index 20f1b35..409e0a9 100644 --- a/target/native/download/sync_test_resources/viash.yaml +++ b/target/native/download/sync_test_resources/viash.yaml @@ -515,5 +515,5 @@ info: output: "target/native/download/sync_test_resources" executable: "target/native/download/sync_test_resources/sync_test_resources" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/nextflow/convert/maxquant_to_h5ad/viash.yaml b/target/nextflow/convert/maxquant_to_h5ad/viash.yaml index 46cfacb..3160b88 100644 --- a/target/nextflow/convert/maxquant_to_h5ad/viash.yaml +++ b/target/nextflow/convert/maxquant_to_h5ad/viash.yaml @@ -1898,5 +1898,5 @@ info: platform: "nextflow" output: "target/nextflow/convert/maxquant_to_h5ad" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/nextflow/convert/thermo_to_mzml/viash.yaml b/target/nextflow/convert/thermo_to_mzml/viash.yaml index 1edc79d..6d43f7b 100644 --- a/target/nextflow/convert/thermo_to_mzml/viash.yaml +++ b/target/nextflow/convert/thermo_to_mzml/viash.yaml @@ -1870,5 +1870,5 @@ info: platform: "nextflow" output: "target/nextflow/convert/thermo_to_mzml" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/nextflow/download/sync_test_resources/viash.yaml b/target/nextflow/download/sync_test_resources/viash.yaml index 77d26c8..a7d72dc 100644 --- a/target/nextflow/download/sync_test_resources/viash.yaml +++ b/target/nextflow/download/sync_test_resources/viash.yaml @@ -1939,5 +1939,5 @@ info: platform: "nextflow" output: "target/nextflow/download/sync_test_resources" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/nextflow/maxquant/maxquant/viash.yaml b/target/nextflow/maxquant/maxquant/viash.yaml index edbd4ea..c7b677d 100644 --- a/target/nextflow/maxquant/maxquant/viash.yaml +++ b/target/nextflow/maxquant/maxquant/viash.yaml @@ -2765,5 +2765,5 @@ info: platform: "nextflow" output: "target/nextflow/maxquant/maxquant" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/nextflow/msdial/msdial_gcms/viash.yaml b/target/nextflow/msdial/msdial_gcms/viash.yaml index 410a4a8..7f82fe1 100644 --- a/target/nextflow/msdial/msdial_gcms/viash.yaml +++ b/target/nextflow/msdial/msdial_gcms/viash.yaml @@ -3270,5 +3270,5 @@ info: platform: "nextflow" output: "target/nextflow/msdial/msdial_gcms" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/nextflow/msdial/msdial_lcms/viash.yaml b/target/nextflow/msdial/msdial_lcms/viash.yaml index bfc218e..2a89d02 100644 --- a/target/nextflow/msdial/msdial_lcms/viash.yaml +++ b/target/nextflow/msdial/msdial_lcms/viash.yaml @@ -4278,5 +4278,5 @@ info: platform: "nextflow" output: "target/nextflow/msdial/msdial_lcms" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines" diff --git a/target/nextflow/qc/rawbeans/viash.yaml b/target/nextflow/qc/rawbeans/viash.yaml index d58b008..7d1caea 100644 --- a/target/nextflow/qc/rawbeans/viash.yaml +++ b/target/nextflow/qc/rawbeans/viash.yaml @@ -1920,5 +1920,5 @@ info: platform: "nextflow" output: "target/nextflow/qc/rawbeans" viash_version: "0.5.15" - git_commit: "9082f742100901e40556dfcf72ca11092ffe09fa" + git_commit: "8a12c5c8d2600d3a79b834ba69ac6f68c0d23b16" git_remote: "https://github.com/czbiohub/mspipelines"