test-coverage.yaml

# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
  push:
    branches: [main, master]
  pull_request:

name: test-coverage

permissions: read-all

jobs:
  test-coverage:
    runs-on: ubuntu-latest
    env:
      GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}

    steps:
      - uses: actions/checkout@v4

      - uses: r-lib/actions/setup-r@v2
        with:
          use-public-rspm: true

      - uses: r-lib/actions/setup-r-dependencies@v2
        with:
          extra-packages: any::covr, any::xml2
          needs: coverage

      - name: Test coverage
        run: |
          # Need to config junit on working dir to locate it
          wdir <- file.path(normalizePath(getwd(), winslash = "/"))
          junfile <- file.path(wdir, "junit.xml")

          # And get the name
          pkgname <- as.character(unname(read.dcf("DESCRIPTION", "Package")))

          # Create junit code as character
          junreport <- paste0(
            "testthat::test_package('",
            pkgname, "', reporter = testthat::JunitReporter$new(file = '", junfile, "'))"
          )

          cov <- covr::package_coverage(
            quiet = FALSE,
            clean = FALSE,
            type = "none",
            install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"),
              winslash = "/"
            ), "package"),
            code = junreport
          )

          # Show results
          print(cov)

          # Generate files for upload in the working dir
          covr::to_cobertura(cov)
        shell: Rscript {0}

      - name: Upload coverage report
        uses: codecov/codecov-action@v5
        with:
          # Fail if error if not on PR, or if on PR and token is given
          fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }}
          files: ./cobertura.xml
          plugins: noop
          disable_search: true
          token: ${{ secrets.CODECOV_TOKEN }}

      - name: Upload test results to Codecov
        if: ${{ !cancelled() }}
        uses: codecov/test-results-action@v1
        with:
          # Fail if error if not on PR, or if on PR and token is given
          fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }}
          file: ./junit.xml
          token: ${{ secrets.CODECOV_TOKEN }}

      - name: Show testthat output
        if: always()
        run: |
          ## --------------------------------------------------------------------
          find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true
        shell: bash

      - name: Upload test results
        if: failure()
        uses: actions/upload-artifact@v4
        with:
          name: coverage-test-failures
          path: ${{ runner.temp }}/package