diff --git a/.github/workflows/build.yml b/.github/workflows/build.yml index 79b09386..807b24af 100644 --- a/.github/workflows/build.yml +++ b/.github/workflows/build.yml @@ -205,7 +205,7 @@ jobs: run: bash scripts/src/build-workflow/props.sh ro # Commit and push - name: Commit OWL files - if: github.actor != 'github-actions[bot]' + if: ${{ github.event_name != 'pull_request' || github.event.action != 'closed' || github.event.pull_request.merged == false }} # do not try to commit if not ran in branch but on PR run: | git checkout "${{ github.ref_name }}" git pull @@ -218,7 +218,6 @@ jobs: else git commit -m "Actions - slim updated" ./external-dev/*.owl || true fi - # Check if there are changes to push if [[ $(git rev-parse --abbrev-ref HEAD) == "${{ github.ref_name }}" ]]; then if [ -n "$(git cherry -v)" ]; then diff --git a/config/ncit.iris b/config/ncit.iris index d50ac114..b6e5c0a0 100644 --- a/config/ncit.iris +++ b/config/ncit.iris @@ -117,4 +117,6 @@ +(http://purl.obolibrary.org/obo/OBI_0100026):http://purl.obolibrary.org/obo/NCIT_C160998 Rat +(http://purl.obolibrary.org/obo/CL_0000010):http://purl.obolibrary.org/obo/NCIT_C20222 Rat cell line +(http://purl.obolibrary.org/obo/UBERON_0000062):http://purl.obolibrary.org/obo/NCIT_C12366 bone -+(http://purl.obolibrary.org/obo/OBI_0100026):http://purl.obolibrary.org/obo/NCIT_C14271 S cerevisiae \ No newline at end of file ++(http://purl.obolibrary.org/obo/OBI_0100026):http://purl.obolibrary.org/obo/NCIT_C14271 S cerevisiae ++(http://www.bioassayontology.org/bao#BAO_0000523):http://purl.obolibrary.org/obo/NCIT_C77680 injection site ++(http://purl.obolibrary.org/obo/UBERON_0000062):http://purl.obolibrary.org/obo/NCIT_C12428 trachea diff --git a/config/obi.iris b/config/obi.iris index 464c0ffc..1a9fbca3 100644 --- a/config/obi.iris +++ b/config/obi.iris @@ -3,4 +3,5 @@ +(http://purl.obolibrary.org/obo/BFO_0000040):http://purl.obolibrary.org/obo/OBI_0100026 organism +(http://purl.obolibrary.org/obo/IAO_0000100):http://purl.obolibrary.org/obo/OBI_0000251 Cluster +(http://purl.bioontology.org/ontology/npo#NPO_1436):http://purl.obolibrary.org/obo/OBI_0002488 pipette -+(http://purl.obolibrary.org/obo/IAO_0000030):http://purl.obolibrary.org/obo/OBI_0002110 digital object identifier \ No newline at end of file ++(http://purl.obolibrary.org/obo/IAO_0000030):http://purl.obolibrary.org/obo/OBI_0002110 digital object identifier ++D(http://www.ebi.ac.uk/efo/EFO_0000487):http://purl.obolibrary.org/obo/OBI_0600007 administering substance in vivo subclass of exposure (process) diff --git a/config/ro-term-file.txt b/config/ro-term-file.txt index 9b6f5b4a..e1fe8a69 100644 --- a/config/ro-term-file.txt +++ b/config/ro-term-file.txt @@ -1 +1,4 @@ -http://purl.obolibrary.org/obo/RO_0000056 \ No newline at end of file +http://purl.obolibrary.org/obo/RO_0000056 +http://purl.obolibrary.org/obo/RO_0002242 has exposure route +http://purl.obolibrary.org/obo/NCIT_C12428 has target end location +http://purl.obolibrary.org/obo/RO_0016004 has exposure medium diff --git a/internal-dev/obi-ext.owl b/internal-dev/obi-ext.owl index 92f62545..2b0fca47 100644 --- a/internal-dev/obi-ext.owl +++ b/internal-dev/obi-ext.owl @@ -647,4 +647,41 @@ + + + + + + Instillation + Drop by drop application of a liquid substance into or onto a location in an organism + + + + + + + + Tracheal instillation + + + + + + + + + + + + + + subcutaneous injection via hydrogel + + + + + + + +