diff --git a/external-dev/aopo-slim.owl b/external-dev/aopo-slim.owl index 78a55dfb..6ec56c91 100644 --- a/external-dev/aopo-slim.owl +++ b/external-dev/aopo-slim.owl @@ -44,11 +44,7 @@ https://raw.githubusercontent.com/jmillanacosta/aop-ontology/patch-1/aopo.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:51:37 -======= - 2023-09-08 09:43:53 ->>>>>>> master + 2023-09-08 11:20:39 27:08:2023 19:12 chebi_ontology human_phenotype diff --git a/external-dev/bfo-slim.owl b/external-dev/bfo-slim.owl index 39e6b860..9c39908d 100644 --- a/external-dev/bfo-slim.owl +++ b/external-dev/bfo-slim.owl @@ -45,11 +45,7 @@ http://purl.obolibrary.org/obo/bfo/classes-only.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:51:48 -======= - 2023-09-08 09:44:06 ->>>>>>> master + 2023-09-08 11:20:59 The http://purl.obolibary.org/obo/bfo/classes-only.owl variant of BFO ("bfo_classes_only.owl") includes only the class hierarchy and annotations from the full OWL version of BFO 2: http://purl.obolibary.org/obo/bfo.owl ("bfo.owl"). There are no object properties or logical axioms that use the object properties in bfo_classes_only.owl. As the logical axioms in the bfo_classes_only.owl variant are limited to subclass and disjoint assertions they are much weaker than the logical axioms in bfo.owl. If you plan to use the relations that define BFO 2, you should import bfo.owl instead of bfo_classes_only.owl. To the extent that the relations are used without importing bfo.owl, be mindful that they should be used in a manner consistent with their use in bfo.owl. Otherwise if your ontology is imported by a another ontology that imports bfo.owl there may be inconsistencies. diff --git a/external-dev/bto-slim.owl b/external-dev/bto-slim.owl index 4f275a40..5b68e55a 100644 --- a/external-dev/bto-slim.owl +++ b/external-dev/bto-slim.owl @@ -20,7 +20,7 @@ http://purl.obolibrary.org/obo/bto.owl OBO-Edit 2.3.1 Slimmer - 2023-09-08 09:44:11 + 2023-09-08 11:21:45 23:10:2021 16:56 BrendaTissueOBO 1.2 diff --git a/external-dev/ccont-slim.owl b/external-dev/ccont-slim.owl index 214c23e0..d4242952 100644 --- a/external-dev/ccont-slim.owl +++ b/external-dev/ccont-slim.owl @@ -15,11 +15,7 @@ https://raw.githubusercontent.com/enanomapper/ontologies/master/internal/ccont-ext.owl Matthias Ganzinger, matthias.ganzinger@med.uni-heidelberg.de Slimmer -<<<<<<< HEAD - 2023-09-08 09:52:23 -======= - 2023-09-08 09:44:12 ->>>>>>> master + 2023-09-08 11:21:49 cell culture ontology (CCONT) 1.1 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/chebi-slim.owl b/external-dev/chebi-slim.owl index 8b830df1..7f3a7dbf 100644 --- a/external-dev/chebi-slim.owl +++ b/external-dev/chebi-slim.owl @@ -17,11 +17,7 @@ http://ftp.ebi.ac.uk/pub/databases/chebi/ontology/chebi_lite.obo Slimmer -<<<<<<< HEAD - 2023-09-08 09:53:28 -======= - 2023-09-08 09:45:02 ->>>>>>> master + 2023-09-08 11:22:55 27:08:2023 19:12 chebi_ontology 1.2 diff --git a/external-dev/cheminf-slim.owl b/external-dev/cheminf-slim.owl index b09e3239..42ef2e60 100644 --- a/external-dev/cheminf-slim.owl +++ b/external-dev/cheminf-slim.owl @@ -79,11 +79,7 @@ http://creativecommons.org/publicdomain/zero/1.0/ http://semanticchemistry.github.io/semanticchemistry/ontology/cheminf.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:52:28 -======= - 2023-09-08 09:44:16 ->>>>>>> master + 2023-09-08 11:21:55 An information artifact is, loosely, a dependent continuant or its bearer that is created as the result of one or more intentional processes. Examples: uniprot, the english language, the contents of this document or a printout of it, the temperature measurements from a weather balloon. For more information, see the project home page at https://github.com/information-artifact-ontology/IAO Document containing upporting external terms IDs allocated to related efforts: PNO: IAO_0020000-IAO_0020999, D_ACTS: IAO_0021000-IAO_0021999 diff --git a/external-dev/chmo-slim.owl b/external-dev/chmo-slim.owl index f249df77..f96fcd60 100644 --- a/external-dev/chmo-slim.owl +++ b/external-dev/chmo-slim.owl @@ -19,11 +19,7 @@ http://purl.obolibrary.org/obo/chmo.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:53:35 -======= - 2023-09-08 09:45:07 ->>>>>>> master + 2023-09-08 11:23:02 1.2 batchelorc This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/clo-slim.owl b/external-dev/clo-slim.owl index a8b25fd0..ef1e6a49 100644 --- a/external-dev/clo-slim.owl +++ b/external-dev/clo-slim.owl @@ -46,11 +46,7 @@ http://purl.obolibrary.org/obo/cl.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:53:54 -======= - 2023-09-08 09:45:22 ->>>>>>> master + 2023-09-08 11:23:23 See PMID:15693950, PMID:12799354, PMID:20123131, PMID:21208450; Contact Alexander Diehl, addiehl@buffalo.edu, University at Buffalo. 2023-08-24 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/efo-slim.owl b/external-dev/efo-slim.owl index 3b69534d..7532d671 100644 --- a/external-dev/efo-slim.owl +++ b/external-dev/efo-slim.owl @@ -55,11 +55,7 @@ License. Sirarat Sarntivijai Tomasz Adamusiak Slimmer -<<<<<<< HEAD - 2023-09-08 09:55:16 -======= - 2023-09-08 09:46:13 ->>>>>>> master + 2023-09-08 11:24:54 2023-08-15 3.57.0 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/envo-slim.owl b/external-dev/envo-slim.owl index be64b1cd..e88a7c3a 100644 --- a/external-dev/envo-slim.owl +++ b/external-dev/envo-slim.owl @@ -35,11 +35,7 @@ https://github.com/EnvironmentOntology/envo/ https://github.com/EnvironmentOntology/envo/issues/ Slimmer -<<<<<<< HEAD - 2023-09-08 09:55:25 -======= - 2023-09-08 09:46:21 ->>>>>>> master + 2023-09-08 11:25:04 ENVO Includes Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/envo/modules/chemical_concentration.owl>) VersionIRI(<null>))) [Axioms: 679 Logical Axioms: 119] Includes Ontology(OntologyID(OntologyIRI(<http://purl.obolibrary.org/obo/envo/modules/entity_attribute.owl>) VersionIRI(<null>))) [Axioms: 206 Logical Axioms: 34] diff --git a/external-dev/fabio-slim.owl b/external-dev/fabio-slim.owl index f68cdb60..12797a3c 100644 --- a/external-dev/fabio-slim.owl +++ b/external-dev/fabio-slim.owl @@ -33,11 +33,7 @@ FaBiO classes are structured according to the FRBR schema of Works, Expressions, fabio http://purl.org/spar/fabio/ Slimmer -<<<<<<< HEAD - 2023-09-08 09:55:31 -======= - 2023-09-08 09:46:27 ->>>>>>> master + 2023-09-08 11:25:22 FaBiO, the FRBR-aligned Bibliographic Ontology, is an ontology for recording and publishing on the Semantic Web bibliographic records of scholarly endeavours. It forms part of SPAR, a suite of Semantic Publishing and Referencing Ontologies. Other SPAR ontologies are described at http://purl.org/spar/. This ontology is available at http://purl.org/spar/fabio, and uses the namespace prefix fabio. diff --git a/external-dev/go-slim.owl b/external-dev/go-slim.owl index 26923ae0..64713649 100644 --- a/external-dev/go-slim.owl +++ b/external-dev/go-slim.owl @@ -24,11 +24,7 @@ http://purl.obolibrary.org/obo/go.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:56:10 -======= - 2023-09-08 09:46:54 ->>>>>>> master + 2023-09-08 11:25:58 gene_ontology 1.2 2023-07-27 diff --git a/external-dev/iao-slim.owl b/external-dev/iao-slim.owl index d5192f81..dfd560ca 100644 --- a/external-dev/iao-slim.owl +++ b/external-dev/iao-slim.owl @@ -57,11 +57,7 @@ http://purl.obolibrary.org/obo/iao.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:56:13 -======= - 2023-09-08 09:46:57 ->>>>>>> master + 2023-09-08 11:26:02 An information artifact is, loosely, a dependent continuant or its bearer that is created as the result of one or more intentional processes. Examples: uniprot, the english language, the contents of this document or a printout of it, the temperature measurements from a weather balloon. For more information, see the project home page at https://github.com/information-artifact-ontology/IAO IDs allocated to related efforts: PNO: IAO_0020000-IAO_0020999, D_ACTS: IAO_0021000-IAO_0021999 IDs allocated to subdomains of IAO. pno.owl: IAO_0020000-IAO_0020999, d-acts.owl: IAO_0021000-IAO_0021999 diff --git a/external-dev/msio-slim.owl b/external-dev/msio-slim.owl index b2dd194b..4da5c879 100644 --- a/external-dev/msio-slim.owl +++ b/external-dev/msio-slim.owl @@ -181,11 +181,7 @@ http://www.cosmos-fp7.eu/WP2 Slimmer Daniel Schober 2017-10-19T10:11:26Z -<<<<<<< HEAD - 2023-09-08 10:01:13 -======= - 2023-09-08 09:50:34 ->>>>>>> master + 2023-09-08 11:31:58 Please see the project site https://github.com/BFO-ontology/BFO, the bfo2 owl discussion group http://groups.google.com/group/bfo-owl-devel, the bfo2 discussion group http://groups.google.com/group/bfo-devel, the tracking google doc http://goo.gl/IlrEE, and the current version of the bfo2 reference http://purl.obolibrary.org/obo/bfo/dev/bfo2-reference.docx. This ontology is generated from a specification at https://github.com/BFO-ontology/BFO/tree/master/src/ontology/owl-group/specification/ and with the code that generates the OWL version in https://github.com/BFO-ontology/BFO/tree/master/src/tools/. A very early version of BFO version 2 in CLIF is at http://purl.obolibrary.org/obo/bfo/dev/bfo.clif. The BSD license on the BFO project site refers to code used to build BFO. This version (1.1.0) uses the Basic Formal Ontology (BFO) as its top level ontology. We might at some point close the resulting semantic gap by using OBI and IAO as intermediate bridges. diff --git a/external-dev/ncit-slim.owl b/external-dev/ncit-slim.owl index d862a53f..5859933f 100644 --- a/external-dev/ncit-slim.owl +++ b/external-dev/ncit-slim.owl @@ -21,11 +21,7 @@ NCI Thesaurus OBO Edition http://purl.obolibrary.org/obo/ncit.owl Slimmer -<<<<<<< HEAD - 2023-09-08 09:59:35 -======= - 2023-09-08 09:49:28 ->>>>>>> master + 2023-09-08 11:29:25 NCI Thesaurus, a controlled vocabulary in support of NCI administrative and scientific activities. Produced by the Enterprise Vocabulary System (EVS), a project by the NCI Center for Biomedical Informatics and Information Technology. National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, U.S.A. 22.07d This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/obcs-slim.owl b/external-dev/obcs-slim.owl index b025cb6a..293d818c 100644 --- a/external-dev/obcs-slim.owl +++ b/external-dev/obcs-slim.owl @@ -27,11 +27,7 @@ http://purl.obolibrary.org/obo/obcs.owl Slimmer -<<<<<<< HEAD - 2023-09-08 10:00:00 -======= - 2023-09-08 09:49:45 ->>>>>>> master + 2023-09-08 11:30:40 101 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/obi-slim.owl b/external-dev/obi-slim.owl index 964c8caa..654b930a 100644 --- a/external-dev/obi-slim.owl +++ b/external-dev/obi-slim.owl @@ -82,11 +82,7 @@ Ontology for Biomedical Investigations http://purl.obolibrary.org/obo/obi.owl Slimmer -<<<<<<< HEAD - 2023-09-08 10:00:08 -======= - 2023-09-08 09:49:49 ->>>>>>> master + 2023-09-08 11:30:47 Please cite the OBI consortium http://purl.obolibrary.org/obo/obi where traditional citation is called for. However it is adequate that individual terms be attributed simply by use of the identifying PURL for the term, in projects that refer to them. 2023-07-25 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/pato-slim.owl b/external-dev/pato-slim.owl index 62bcd095..f86af46d 100644 --- a/external-dev/pato-slim.owl +++ b/external-dev/pato-slim.owl @@ -39,11 +39,7 @@ http://purl.obolibrary.org/obo/pato.owl Slimmer -<<<<<<< HEAD - 2023-09-08 10:00:27 -======= - 2023-09-08 09:50:03 ->>>>>>> master + 2023-09-08 11:31:04 quality 1.2 2023-05-18 diff --git a/external-dev/sio-slim.owl b/external-dev/sio-slim.owl index 042f9fbd..bb0322f4 100644 --- a/external-dev/sio-slim.owl +++ b/external-dev/sio-slim.owl @@ -80,11 +80,7 @@ mailing list: http://groups.google.com/group/sio-ontology role chains: 'has capability' o 'is realized in' -> 'is participant in' Slimmer -<<<<<<< HEAD - 2023-09-08 10:00:31 -======= - 2023-09-08 09:50:06 ->>>>>>> master + 2023-09-08 11:31:08 http://sio.semanticscience.org 1.59 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer. diff --git a/external-dev/uberon-slim.owl b/external-dev/uberon-slim.owl index 595b51c8..404d35cf 100644 --- a/external-dev/uberon-slim.owl +++ b/external-dev/uberon-slim.owl @@ -158,11 +158,7 @@ https://github.com/obophenotype/uberon/issues/ https://lists.sourceforge.net/lists/listinfo/obo-anatomy Slimmer -<<<<<<< HEAD - 2023-09-08 10:01:00 -======= - 2023-09-08 09:50:28 ->>>>>>> master + 2023-09-08 11:31:38 uberon 1.2 AEO diff --git a/external-dev/uo-slim.owl b/external-dev/uo-slim.owl index a50ccee2..22510fae 100644 --- a/external-dev/uo-slim.owl +++ b/external-dev/uo-slim.owl @@ -12,11 +12,7 @@ http://purl.obolibrary.org/obo/uo.owl Slimmer -<<<<<<< HEAD - 2023-09-08 10:01:08 -======= - 2023-09-08 09:50:30 ->>>>>>> master + 2023-09-08 11:31:45 2023-05-25 This SLIM file was generated automatically by the eNanoMapper Slimmer software library. For more information see http://github.com/enanomapper/slimmer.