From 6c8a6b9c830fe19888944408dd65013049029022 Mon Sep 17 00:00:00 2001 From: Suchen ZHENG Date: Fri, 18 Oct 2024 13:53:42 -0400 Subject: [PATCH] Update syllabus.md --- syllabus.md | 40 +++------------------------------------- 1 file changed, 3 insertions(+), 37 deletions(-) diff --git a/syllabus.md b/syllabus.md index a1adae4..feb6289 100755 --- a/syllabus.md +++ b/syllabus.md @@ -26,7 +26,10 @@ Please see [last year's syllabus](http://cbb752b23.gersteinlab.org/syllabus) (wi | 2/26 | MINING - Unsupervised Mining #2 + Single-Cell Analysis #1 | | | | | 3/3 | MINING - Single-Cell Analysis #2 + Medical Image Analysis | | | | | 3/5 | MINING - Network Analysis | | | | +| | | | | | +| | | | | | | 3/7 | Spring break begins | | | | +| | | | | | 3/24 | MINING - Privacy | | | | | 3/26 | MINING/MODELING - Deep Learning Advanced I | | | | | 3/31 | MINING/MODELING - Deep Learning Advanced II | | | | @@ -42,43 +45,6 @@ Please see [last year's syllabus](http://cbb752b23.gersteinlab.org/syllabus) (wi | 5/7 | \*YALE\* Final examinations end | | | -| Date | Topic | This year’s lecture | [Last year’s lecture](http://cbb752b23.gersteinlab.org/syllabus) | Comment | -| ---- | ---------------------------------------------------------------------------- | ------------------- | ---------------------------------------------------------------- | ------- | -| 1/13 | \*YALE\* Spring term classes begin, 8.20 a.m. | | | | -| | | | | -| 1/13 | Introduction | | 23i1 | | -| 1/14 | DATA 1 - Genomics I | | 23d1 | | -| 1/22 | DATA 2 - Genomics II | | 23d2 | | -| 1/27 | DATA 3 - Proteomics I | | 23d3 | | -| 2/29 | DATA 4 - Proteomics II | | 23d4 | | -| 2/3 | MINING 1 - Personal Genomes + Seq. Comparison + Multi-seq Alignment | | 23i2a, 23m3, 23m4 | | -| 2/5 | MINING 2 - Fast Alignment + Variant Calling (incl. a focused section on SVs) | | 23m5,23m6a | | -| 2/10 | MINING 3 - Basic Multi-Omics Supervised Mining #1 | | 23m6b,23m7,23m8a | | -| 2/12 | MINING 4 - Supervised Mining #2 + Unsupervised Mining #1 | | 23m8b,23m8c,23m9a,23m9c | | -| 2/17 | DATA 5 - Knowledge Representation & Databases | | 23d5 | | -| 2/19 | MINING 5 - Unsupervised Mining #2 + Single-Cell Analysis | | 23m9d, 23m9e | | -| 2/24 | Quiz on 1st Half | | | | -| 2/26 | TOPICS 1 - Single-Cell Analysis (continues) + Privacy | | 23t1, 23t2 | | -| 3/3 | TOPICS 2 - Network Analysis | | 23m10a, 23m10b, 23m10c, 23m10d, 23m10e | | -| 3/5 | TOPICS 3 - Personal Genomes (from an individual's perspective) | | 23i2b | | -| | | | | | -| | | | | | -| 3/7 | Spring break begins | | | | -| | | | | -| 3/24 | TOPICS 4 - Deep Learning Fundamentals | | 23m12a | | -| 3/26 | TOPICS 5 - Deep Learning Fundamentals (continues) | | 23m12b | | -| 3/31 | TOPICS 6 - Deep Learning for Biology + Biosensor Data Analysis | | 22t3, 22t4 | | -| 4/2 | MODELING 1 - Protein Simulation I | | 23s1 | | -| 4/7 | MODELING 2 - Protein Simulation II | | 23s2 | | -| 4/9 | MODELING 3 - Protein Simulation III | | 23s3 | | -| 4/14 | MODELING 4 - Protein Simulation IV | | 23s4 | | -| 4/16 | MODELING 5 - Protein Simulation V | | | | -| 4/21 | Quiz on 2nd Half | | | | -| 4/23 | Final Presentations | | | | -| 4/25 | \*YALE\* Classes end; Reading period begins | | | | -| 5/1 | \*YALE\* Final examinations begin | | | | -| 5/7 | \*YALE\* Final examinations end | | | - ### Lecture Slide Pack See also additional readings for each topic: [Additional Readings](https://docs.google.com/document/d/1L7p4fv3XzMvzzTPIa4EFo6YD9UabBDuOBWKGjcxe5hw/edit)