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Avoid Conda wherever possible #45

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tefirman opened this issue Sep 26, 2024 · 1 comment · Fixed by #51
Closed

Avoid Conda wherever possible #45

tefirman opened this issue Sep 26, 2024 · 1 comment · Fixed by #51

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@tefirman
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With the recent shenanigans with Conda's license model, we should avoid using conda images wherever possible. SciComp mentioned that it's still okay to use Miniconda as long as you switch your distribution channel or something, but not sure if that's worth the trouble.
@Sanaz01
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Sanaz01 commented Oct 16, 2024

#315861a26040adc465c652d21a51807cd96a6c59 added for GATK

@Sanaz01 Sanaz01 linked a pull request Oct 17, 2024 that will close this issue
switching to free conda channels for GATK and pfastqdump #51
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switching to free conda channels for GATK and pfastqdump getwilds/wilds-docker-library
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@tefirman @Sanaz01