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Compiling Python bindings from source fails #38

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ziadloo opened this issue Mar 11, 2024 · 1 comment
Open

Compiling Python bindings from source fails #38

ziadloo opened this issue Mar 11, 2024 · 1 comment

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@ziadloo
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ziadloo commented Mar 11, 2024 •
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After applying some shady fixes to the source (documented in issue #37), I tried to compile the Python binding. But that one fails as well.

Before anything, the state of my system:

❯ python --version
Python 3.12.2

❯ pybind11-config --version
2.11.1

These are the steps I've taken:

conda create -n gtn_env
conda activate gtn_env

cd bindings/python
conda install setuptools

python setup.py install

This leads to the following error:

running install
/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` and ``easy_install``.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://github.com/pypa/setuptools/issues/917 for details.
        ********************************************************************************

!!
  self.initialize_options()
running bdist_egg
running egg_info
writing src/bindings/python/gtn.egg-info/PKG-INFO
writing dependency_links to src/bindings/python/gtn.egg-info/dependency_links.txt
writing top-level names to src/bindings/python/gtn.egg-info/top_level.txt
reading manifest file 'src/bindings/python/gtn.egg-info/SOURCES.txt'
writing manifest file 'src/bindings/python/gtn.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
running build_ext
CMake Warning (dev) at CMakeLists.txt:11 (find_package):
  Policy CMP0146 is not set: The FindCUDA module is removed.  Run "cmake
  --help-policy CMP0146" for policy details.  Use the cmake_policy command to
  set the policy and suppress this warning.

This warning is for project developers.  Use -Wno-dev to suppress it.

-- Building Python bindings.
CMake Deprecation Warning at cmake/pybind11Tools.cmake:8 (cmake_minimum_required):
  Compatibility with CMake < 3.5 will be removed from a future version of
  CMake.

  Update the VERSION argument <min> value or use a ...<max> suffix to tell
  CMake that the project does not need compatibility with older versions.
Call Stack (most recent call first):
  CMakeLists.txt:71 (include)


CMake Warning (dev) at cmake/FindPythonLibsNew.cmake:60 (find_package):
  Policy CMP0148 is not set: The FindPythonInterp and FindPythonLibs modules
  are removed.  Run "cmake --help-policy CMP0148" for policy details.  Use
  the cmake_policy command to set the policy and suppress this warning.

Call Stack (most recent call first):
  cmake/pybind11Tools.cmake:16 (find_package)
  CMakeLists.txt:71 (include)
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Configuring done (0.1s)
CMake Warning (dev) in CMakeLists.txt:
  Policy CMP0104 is not set: CMAKE_CUDA_ARCHITECTURES now detected for NVCC,
  empty CUDA_ARCHITECTURES not allowed.  Run "cmake --help-policy CMP0104"
  for policy details.  Use the cmake_policy command to set the policy and
  suppress this warning.

  CUDA_ARCHITECTURES is empty for target "gtn".
This warning is for project developers.  Use -Wno-dev to suppress it.

-- Generating done (0.0s)
-- Build files have been written to: /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312
[  2%] Performing update step for 'pybind11'
[  4%] Building CXX object CMakeFiles/gtn.dir/gtn/autograd.cpp.o
[  6%] Building CXX object CMakeFiles/gtn.dir/gtn/cpu/creations.cpp.o
[  8%] Building CXX object CMakeFiles/gtn.dir/gtn/cpu/compose.cpp.o
[ 10%] No patch step for 'pybind11'
[ 12%] No configure step for 'pybind11'
[ 14%] No build step for 'pybind11'
[ 17%] No install step for 'pybind11'
[ 19%] Completed 'pybind11'
[ 23%] Built target pybind11
[ 25%] Building CXX object CMakeFiles/gtn.dir/gtn/cpu/functions.cpp.o
[ 27%] Building CXX object CMakeFiles/gtn.dir/gtn/cpu/shortest.cpp.o
[ 29%] Building CXX object CMakeFiles/gtn.dir/gtn/creations.cpp.o
[ 31%] Building CXX object CMakeFiles/gtn.dir/gtn/device.cpp.o
[ 34%] Building CXX object CMakeFiles/gtn.dir/gtn/criterions.cpp.o
[ 36%] Building CXX object CMakeFiles/gtn.dir/gtn/functions.cpp.o
[ 38%] Building CXX object CMakeFiles/gtn.dir/gtn/graph.cpp.o
[ 40%] Building CXX object CMakeFiles/gtn.dir/gtn/parallel/parallel_map.cpp.o
[ 42%] Building CXX object CMakeFiles/gtn.dir/gtn/rand.cpp.o
[ 44%] Building CXX object CMakeFiles/gtn.dir/gtn/utils.cpp.o
[ 46%] Building CUDA object CMakeFiles/gtn.dir/gtn/cuda/creations.cu.o
[ 48%] Building CUDA object CMakeFiles/gtn.dir/gtn/cuda/compose.cu.o
[ 51%] Building CUDA object CMakeFiles/gtn.dir/gtn/cuda/cuda.cu.o
[ 53%] Building CXX object CMakeFiles/gtn.dir/gtn/cuda/functions.cpp.o
[ 55%] Building CUDA object CMakeFiles/gtn.dir/gtn/cuda/shortest.cu.o
[ 57%] Linking CXX static library libgtn.a
[ 57%] Built target gtn
[ 59%] Building CXX object bindings/python/CMakeFiles/functions.dir/gtn/functions.cpp.o
[ 61%] Building CXX object bindings/python/CMakeFiles/graph.dir/gtn/graph.cpp.o
[ 65%] Building CXX object bindings/python/CMakeFiles/utils.dir/gtn/utils.cpp.o
[ 65%] Building CXX object bindings/python/CMakeFiles/device.dir/gtn/device.cpp.o
In file included from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:16,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/attr.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/numpy.h:12,
                 from /home/mehran/tmp/gtn/bindings/python/src/bindings/python/gtn/graph.cpp:11:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h: In function ‘std::string pybind11::detail::error_string()’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h:482:26: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’}
  482 |             frame = frame->f_back;
      |                          ^~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:42,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/common.h:186,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pytypes.h:12,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:13:
/home/mehran/.conda/envs/gtn_env/include/python3.12/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’}
   22 | typedef struct _frame PyFrameObject;
      |                ^~~~~~
In file included from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:16,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/attr.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/src/bindings/python/gtn/functions.cpp:8:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h: In function ‘std::string pybind11::detail::error_string()’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h:482:26: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’}
  482 |             frame = frame->f_back;
      |                          ^~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:42,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/common.h:186,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pytypes.h:12,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:13:
/home/mehran/.conda/envs/gtn_env/include/python3.12/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’}
   22 | typedef struct _frame PyFrameObject;
      |                ^~~~~~
In file included from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:16,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/attr.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/src/bindings/python/gtn/device.cpp:2:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h: In function ‘std::string pybind11::detail::error_string()’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h:482:26: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’}
  482 |             frame = frame->f_back;
      |                          ^~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:42,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/common.h:186,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pytypes.h:12,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:13:
/home/mehran/.conda/envs/gtn_env/include/python3.12/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’}
   22 | typedef struct _frame PyFrameObject;
      |                ^~~~~~
In file included from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:16,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/attr.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:13,
                 from /home/mehran/tmp/gtn/bindings/python/src/bindings/python/gtn/utils.cpp:8:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h: In function ‘std::string pybind11::detail::error_string()’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/type_caster_base.h:482:26: error: invalid use of incomplete type ‘PyFrameObject’ {aka ‘struct _frame’}
  482 |             frame = frame->f_back;
      |                          ^~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:42,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/detail/common.h:186,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pytypes.h:12,
                 from /home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/cast.h:13:
/home/mehran/.conda/envs/gtn_env/include/python3.12/pytypedefs.h:22:16: note: forward declaration of ‘PyFrameObject’ {aka ‘struct _frame’}
   22 | typedef struct _frame PyFrameObject;
      |                ^~~~~~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:38:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::function pybind11::detail::get_type_override(const void*, const type_info*, const char*)’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:54: error: ‘PyCodeObject’ {aka ‘struct PyCodeObject’} has no member named ‘co_varnames’; did you mean ‘co_names’?
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                                                      ^~~~~~~~~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/pyport.h:24:38: note: in definition of macro ‘_Py_CAST’
   24 | #define _Py_CAST(type, expr) ((type)(expr))
      |                                      ^~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/cpython/tupleobject.h:28:38: note: in expansion of macro ‘_PyTuple_CAST’
   28 | #define PyTuple_GET_ITEM(op, index) (_PyTuple_CAST(op)->ob_item[(index)])
      |                                      ^~~~~~~~~~~~~
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:29: note: in expansion of macro ‘PyTuple_GET_ITEM’
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                             ^~~~~~~~~~~~~~~~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:38:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::function pybind11::detail::get_type_override(const void*, const type_info*, const char*)’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:54: error: ‘PyCodeObject’ {aka ‘struct PyCodeObject’} has no member named ‘co_varnames’; did you mean ‘co_names’?
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                                                      ^~~~~~~~~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/pyport.h:24:38: note: in definition of macro ‘_Py_CAST’
   24 | #define _Py_CAST(type, expr) ((type)(expr))
      |                                      ^~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/cpython/tupleobject.h:28:38: note: in expansion of macro ‘_PyTuple_CAST’
   28 | #define PyTuple_GET_ITEM(op, index) (_PyTuple_CAST(op)->ob_item[(index)])
      |                                      ^~~~~~~~~~~~~
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:29: note: in expansion of macro ‘PyTuple_GET_ITEM’
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                             ^~~~~~~~~~~~~~~~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:38:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::function pybind11::detail::get_type_override(const void*, const type_info*, const char*)’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:54: error: ‘PyCodeObject’ {aka ‘struct PyCodeObject’} has no member named ‘co_varnames’; did you mean ‘co_names’?
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                                                      ^~~~~~~~~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/pyport.h:24:38: note: in definition of macro ‘_Py_CAST’
   24 | #define _Py_CAST(type, expr) ((type)(expr))
      |                                      ^~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/cpython/tupleobject.h:28:38: note: in expansion of macro ‘_PyTuple_CAST’
   28 | #define PyTuple_GET_ITEM(op, index) (_PyTuple_CAST(op)->ob_item[(index)])
      |                                      ^~~~~~~~~~~~~
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:29: note: in expansion of macro ‘PyTuple_GET_ITEM’
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                             ^~~~~~~~~~~~~~~~
In file included from /home/mehran/.conda/envs/gtn_env/include/python3.12/Python.h:38:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h: In function ‘pybind11::function pybind11::detail::get_type_override(const void*, const type_info*, const char*)’:
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:54: error: ‘PyCodeObject’ {aka ‘struct PyCodeObject’} has no member named ‘co_varnames’; did you mean ‘co_names’?
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                                                      ^~~~~~~~~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/pyport.h:24:38: note: in definition of macro ‘_Py_CAST’
   24 | #define _Py_CAST(type, expr) ((type)(expr))
      |                                      ^~~~
/home/mehran/.conda/envs/gtn_env/include/python3.12/cpython/tupleobject.h:28:38: note: in expansion of macro ‘_PyTuple_CAST’
   28 | #define PyTuple_GET_ITEM(op, index) (_PyTuple_CAST(op)->ob_item[(index)])
      |                                      ^~~~~~~~~~~~~
/home/mehran/tmp/gtn/bindings/python/build/temp.linux-x86_64-cpython-312/pybind11/src/pybind11/include/pybind11/pybind11.h:2348:29: note: in expansion of macro ‘PyTuple_GET_ITEM’
 2348 |                     locals, PyTuple_GET_ITEM(f_code->co_varnames, 0)
      |                             ^~~~~~~~~~~~~~~~
make[2]: *** [bindings/python/CMakeFiles/utils.dir/build.make:76: bindings/python/CMakeFiles/utils.dir/gtn/utils.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:272: bindings/python/CMakeFiles/utils.dir/all] Error 2
make[1]: *** Waiting for unfinished jobs....
make[2]: *** [bindings/python/CMakeFiles/device.dir/build.make:76: bindings/python/CMakeFiles/device.dir/gtn/device.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:218: bindings/python/CMakeFiles/device.dir/all] Error 2
make[2]: *** [bindings/python/CMakeFiles/graph.dir/build.make:76: bindings/python/CMakeFiles/graph.dir/gtn/graph.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:191: bindings/python/CMakeFiles/graph.dir/all] Error 2
make[2]: *** [bindings/python/CMakeFiles/functions.dir/build.make:76: bindings/python/CMakeFiles/functions.dir/gtn/functions.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:245: bindings/python/CMakeFiles/functions.dir/all] Error 2
make: *** [Makefile:136: all] Error 2
Traceback (most recent call last):
  File "/home/mehran/tmp/gtn/bindings/python/setup.py", line 100, in <module>
    setup(
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/__init__.py", line 103, in setup
    return distutils.core.setup(**attrs)
           ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/core.py", line 185, in setup
    return run_commands(dist)
           ^^^^^^^^^^^^^^^^^^
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/core.py", line 201, in run_commands
    dist.run_commands()
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
    self.run_command(cmd)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/dist.py", line 989, in run_command
    super().run_command(command)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
    cmd_obj.run()
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/command/install.py", line 84, in run
    self.do_egg_install()
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/command/install.py", line 132, in do_egg_install
    self.run_command('bdist_egg')
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/cmd.py", line 318, in run_command
    self.distribution.run_command(command)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/dist.py", line 989, in run_command
    super().run_command(command)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
    cmd_obj.run()
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/command/bdist_egg.py", line 167, in run
    cmd = self.call_command('install_lib', warn_dir=0)
          ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/command/bdist_egg.py", line 153, in call_command
    self.run_command(cmdname)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/cmd.py", line 318, in run_command
    self.distribution.run_command(command)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/dist.py", line 989, in run_command
    super().run_command(command)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
    cmd_obj.run()
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/command/install_lib.py", line 11, in run
    self.build()
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/command/install_lib.py", line 111, in build
    self.run_command('build_ext')
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/cmd.py", line 318, in run_command
    self.distribution.run_command(command)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/dist.py", line 989, in run_command
    super().run_command(command)
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
    cmd_obj.run()
  File "/home/mehran/tmp/gtn/bindings/python/setup.py", line 53, in run
    self.build_extension(ext)
  File "/home/mehran/tmp/gtn/bindings/python/setup.py", line 95, in build_extension
    subprocess.check_call(
  File "/home/mehran/.conda/envs/gtn_env/lib/python3.12/subprocess.py", line 413, in check_call
    raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['cmake', '--build', '.', '--config', 'Release', '--', '-j4']' returned non-zero exit status 2.
@ziadloo ziadloo changed the title Python bindings from source fails Compiling Python bindings from source fails Mar 11, 2024
@ziadloo
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ziadloo commented Mar 11, 2024

Apparently, this is an incompatibility with Python version and the latest Python version that works is 3.10:

conda create -n gtn_env python=3.10.13

This way I managed to at least compile the Python binding. Next, let see if the library works.

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