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RuntimeError when label_statistics calls pyopencl on M1 iMac #19

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jqwhite opened this issue Jan 30, 2023 · 0 comments

jqwhite commented Jan 30, 2023

Notebook runs on Intel Macs and GPU on HPC.

The following should reproduce the issue:

Install devbio-napari into a new conda environment on an M1 Mac.
run a call to label_statistics, shown in the minimal_example_OpenCL_label_statistics.ipynb notebook

statistics = label_statistics(nuclei, image1_vol, 
                              intensity=True, 
                              size=True, 
                              shape=True, 
                              perimeter=False, 
                              position=False,
                              moments=False
                             )

Environment packages in tf-napari.txt.

Notebook minimal_example_OpenCL_label_statistics.ipynb run on an M1 Mac should demonstrate the issue.

minimal_example_OpenCL_label_statistics.ipynb.zip
tf-napari.txt

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