Parallel Coordinates Prototype is a simple HTML web application using D3.js.
Deploy in any web content container using the following directory structure:
- index.html (can be renamed)
- data/variants.tsv
- data/samples.tsv
| Column | Type | Description |
|---|---|---|
| Gene | String | Must match gene in samples.tsv |
| Coordinate | String | e.g. chr7:123456789 |
| MAF(%) | Decimal | e.g. 0.01 |
| Polyphen2 prediction | Decimal | e.g. 0.01 |
| Gene Function | String | |
| Minor Allele Transmitted | String | |
| Major Allele Transmitted | String | |
| EUR | Decimal | Admixture Ratio |
| ASN | Decimal | Admixture Ratio |
| AFA | Decimal | Admixture Ratio |
| AMR | Decimal | Admixture Ratio |
| Column | Type | Description |
|---|---|---|
| Gene | String | Must match gene in variants.tsv |
| SampleID | String | Accepts any number of arbitrary columns |
| EUR | Decimal | Admixture Ratio |
| ASN | Decimal | Admixture Ratio |
| AFA | Decimal | Admixture Ratio |
| AMR | Decimal | Admixture Ratio |