diff --git a/content/collaboration/communication/monthly-meetings/2023-meetings/20230629.md b/content/collaboration/communication/monthly-meetings/2023-meetings/20230629.md new file mode 100644 index 000000000..e24ca1831 --- /dev/null +++ b/content/collaboration/communication/monthly-meetings/2023-meetings/20230629.md @@ -0,0 +1,122 @@ +--- +title: ICAT Collaboration Meeting - 29th June 2023 +date: 2023-09-29 +chair: Alejandra Gonzalez-Beltran +scribe: Patrick Austin +--- + +Attendees: +- Patrick +- Nicolas Soler +- Rolf Krahl +- Louise +- Allan Pinto +- Alexander +- Alejandra +- Marjolaine + +Apologies: + +- Alex de Maria (ESRF) +- Andy Goetz (ESRF) +- Kevin +- Malik +- Gabriel Preuß + + +## Site Updates +### ESRF (Marjolaine): +Busy with 3-days visit from DLS people on Thursday +- Spoke a lot about data management + +Alex spoke at ispyb collab meeting about putting their data into ICAT DB +Working on generic sample tracking for all beamlines (merging ISPyB and ICAT sample tracking) +Had corrupted Etherpad files, have removed from frontend and placed it on standby (deployed, but hidden from users) + +### HZB (Rolf): +Cyber attack two weeks ago, "everything is down" (including email) +- Lots of Windows PCs have been infected, encrypting files +- No known instances of Linux machines being affected - confident about the data infrastructure + - But no way to check +- Forensic experts are currently investigation, rumoured to be a matter of weeks before bringing things back + +Would be interested in meeting re: logbooks + +### ALBA (Nicolas) +In process of implementing ICAT on beamline +Desigining the metadata that should be uploaded to ICAT +Also exploring the logbook (will need ICAT+ API) + +### Sirius (Allan) +Not too much to report +Deciding on data format for tomographic beamlines (already have it for other domain) +Then will begin ingest, play around with project and try to understand the components +Want to test: +- Kubernetes (hope to have feedback by next meeting) - looking at ALBA's solution + +### ISIS +Don't think Will Taylor has been able to work on this recently + +### DLS +Effort migrating tape archive from castor to CTA +Pre-prod installation for Payara6 +- Alan has been making releases for this + + +### ICAT 6 / Payara 6 +- Want to encourage adoption of Payara6 (for security concerns and to avoid having to support multiple versions) + - HZB: soonish + - ESRF: no plan yet, TBD + - Sirius: using 5 + - ALBA: don't know +- Deadline for moving? TBD via mailing list or in future meeting + +## Component Updates + +### python-icat +More or less ready for 1.1 release: +- Provides an IngestReader, which was implemented in HZB specific code before and is now moved into main python-icat codebase +- Few minor fixes + +Q: Do we want a snapshot, or release outright (do not expect compatibility issues)? +- DG-API pins the version, so we can test afterwards +- Direct release is fine + +Expect tomorrow or next week + +### Logbooks (timestamped version) +Interest from multiple facilities +HZB working on making it suitable for multiple facilities +- Ideally want to push changes upstream to ESRF + - Need to tweak things which are "hardcoded" to ESRF logic, this is the main effort currently, making them configurable +- Using the DataHub verson, **not** the standalone version + +ESRF working on the DataPortal version too, one item of the plan is to make it standalone version (not clear when) + +### Notebooks (Etherpad version) +STFC student has been adapting the permissions and work on endpoint, use DG-API or speak with ICAT server. +Concerns of the corruptions of pads, under investigation. +Other concern is suitability of Etherpad due to the lack of updates. There has been some activitiy in the repository. +There are some alternatives: +- Tiny MCE +- Only office +- https://github.com/xwiki-labs/cryptpad +- https://github.com/hedgedoc/hedgedoc + +Permissions would be configurable. +ESRF - they haven't had time to investigate a lot but scientists complain because when they entered images or tables, it wasn't working. + +### Upload + +### Sample tracking + +Question from Allan - information per sample might be different for each group wanting to implement sample tracking, is it better to implement a standalone solution? +- ESRF have ICAT(+) (for all beamlines) and ispyb (for MX) and are trying to merge these +- Have a configuration (processing plan) for each beamline +- Interface retrieves config and displays the relevant column +- Generic (configurable) solution + +Currently collating the information from the three interested groups, will reach out in the future. + +## AOB +Availability for July/August meetings? diff --git a/content/collaboration/communication/monthly-meetings/index.md b/content/collaboration/communication/monthly-meetings/index.md index adc6415f5..5ac80fa56 100644 --- a/content/collaboration/communication/monthly-meetings/index.md +++ b/content/collaboration/communication/monthly-meetings/index.md @@ -32,3 +32,4 @@ Records of the meetings are grouped by year: - [2017](/collaboration/communication/monthly-meetings/2017-meetings/ "2017 Meetings") - [2018](/collaboration/communication/monthly-meetings/2018-meetings/ "2018 Meetings") - [2019](/collaboration/communication/monthly-meetings/2019-meetings/ "2019 Meetings") +- [2023](/collaboration/communication/monthly-meetings/2023-meetings/ "2023 Meetings")