From 9950bbe93ca233b6e3ae5f1e443e4fdfa1d6bce4 Mon Sep 17 00:00:00 2001 From: Damiano Oldoni Date: Thu, 13 Jul 2023 10:38:00 +0200 Subject: [PATCH] Improve text and length lines --- R/read_camtrap_dp.R | 13 +++++++------ 1 file changed, 7 insertions(+), 6 deletions(-) diff --git a/R/read_camtrap_dp.R b/R/read_camtrap_dp.R index 5adc496c..051c9083 100644 --- a/R/read_camtrap_dp.R +++ b/R/read_camtrap_dp.R @@ -24,7 +24,10 @@ #' @examples #' \dontrun{ #' # Read Camtrap DP package -#' camtrap_dp_file <- system.file("extdata", "mica", "datapackage.json", package = "camtraptor") +#' camtrap_dp_file <- system.file( +#' "extdata", "mica", "datapackage.json", +#' package = "camtraptor" +#' ) #' muskrat_coypu <- read_camtrap_dp(camtrap_dp_file) #' #' # Read Camtrap DP package and ignore media file @@ -106,8 +109,8 @@ read_camtrap_dp <- function(file = NULL, # get resource names resource_names <- purrr::map_chr(package$resource, ~.$name) - # transform package metadata formatted using Camtrap DP 1.0-rc.1 standard to avoid - # breaking changes + # transform package metadata formatted using Camtrap DP 1.0-rc.1 standard to + # avoid breaking changes if (version == "1.0-rc.1") { names(package)[names(package) == "observationLevel"] <- "classificationLevel" if ("sequenceInterval" %in% names(package)) { @@ -260,7 +263,7 @@ read_camtrap_dp <- function(file = NULL, } } - # transform media formatted using Camtrap DP 1.0-rc.1 standard to avoid + # transform observations formatted using Camtrap DP 1.0-rc.1 standard to avoid # breaking changes if (version == "1.0-rc.1") { # only event-type obs are supported @@ -305,7 +308,6 @@ read_camtrap_dp <- function(file = NULL, observations <- observations %>% dplyr::mutate("countNew" = NA) } - if ("behavior" %in% names(observations)) { observations <- observations %>% dplyr::rename(behaviour = "behavior") @@ -354,7 +356,6 @@ read_camtrap_dp <- function(file = NULL, "observations" = observations ) package$data <- data - # get taxonomic info from metadata taxon_infos <- get_species(package) # add vernacular names to observations