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Code_Examples.md

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Code examples for decenttree

List of files

File Content
headeronlydecenttree.cpp This example shows how to use decent tree as a header-only library.
vectordecenttree.cpp This example shows how to use one of decenttree's vectorized neighbour-joining algorithms (the vectorisation only works on Intel hardware)
examplematrix.h
examplematrix.cpp
These two files define the example distance matrix that is used by headeronlydecenttree.cpp and vectordecenttree.cpp
fakevector.h
differentvector.cpp
These files illustrate how you could use a different vector class implementation (on non-Wintel hardware) with decenttree. fakevector.h shows what member functions a class must support, if it is to be used to specialize the vectorized neighbour-joining algorithms in the decenttree library.