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jrc_mus-nacc-3 #29

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jonesa3 opened this issue Jun 21, 2024 · 7 comments
Open

jrc_mus-nacc-3 #29

jonesa3 opened this issue Jun 21, 2024 · 7 comments
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@davidackerman
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🎨 manual only small number of nuclei; no predictions needed

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jonesa3 commented Jun 21, 2024

No description provided.

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jonesa3 commented Jun 25, 2024

used s3 (64nm seemed too low for this dataset)

@jonesa3 jonesa3 assigned aemmav and unassigned jonesa3 Jun 25, 2024
@aemmav aemmav added the 🎨 manual only small number of nuclei; no predictions needed label Jul 2, 2024
@aemmav aemmav assigned jonesa3 and unassigned aemmav Jul 2, 2024
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jonesa3 commented Jul 2, 2024

proofread tif found here: /avetissiane/tiff_slices/jrc_mus-nacc-3/s3_amira_proofread.tif

@jonesa3 jonesa3 assigned yuriyzubov and unassigned jonesa3 Jul 2, 2024
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/avetissiane/tiff_slices/jrc_mus-nacc-3/s3_amira_proofread.zarr

@yuriyzubov yuriyzubov assigned rinva and unassigned yuriyzubov Jul 8, 2024
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jrc_mus-nacc-3.zarr/recon-2/labels/inference/segmentations/nuc

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rinva commented Jul 29, 2024

Image

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rinva commented Aug 27, 2024

DOI created
https://doi.org/10.25378/janelia.26513212 https://figshare.com/s/bce87a9392ceeac970ab

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rinva commented Sep 4, 2024

thumbnail created and written to nrs.

nrs/data/jrc_mus-nacc-3/thumbnail_nuc.jpg

@rinva rinva assigned yuriyzubov and davidackerman and unassigned rinva and yuriyzubov Sep 4, 2024
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🎨 manual only small number of nuclei; no predictions needed
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@yuriyzubov @davidackerman @rinva @jonesa3 @aemmav