Skip to content

Latest commit

 

History

History
10 lines (5 loc) · 370 Bytes

README.md

File metadata and controls

10 lines (5 loc) · 370 Bytes

To convert mrc file to zarr array, first install poetry project and python dependencies:

cd PATH_TO_POETRY_PROJECT_DIRECTORY/
poetry install

run script using cli:

poetry run python3 src/zarr_to_mrc.py  --src=PATH_TO_MRC_FILE --dest=OUTPUT_ZARR_FILE --cluster=local/lsf --workers=50 --scale 10.0 10.0 10.0 --units nanometer nanometer nanometer