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The fitness of a solution doesn't currently take cuts into account. It's mostly driven by the ratio free_area / total_area. It's not immediately clear to me how I would add cuts into the equation, but maybe I'll play around with it when I get some time.
I found a trivial case where human layout scores better than cut_optimizer_2d driven layout. I have documented it below.
My scoring criteria was reducing waste (no change) and reducing cut lines (human solution preferred).
Thank you for authoring this lovely piece of software.
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