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how to out put all location of local alignment #75

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yipukangda opened this issue Jun 24, 2024 · 4 comments
Open

how to out put all location of local alignment #75

yipukangda opened this issue Jun 24, 2024 · 4 comments

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@yipukangda
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Hi, I use parasail local alignment function, and want to get all hits of local alignments(the template indeed contains multiple similar regions), but it seems just output the best one, what should I do if I want to get all hit regions.

thanks

@jeffdaily
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That feature is not currently supported.

@yipukangda
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Thank you. Do you have any intentions or plans to include this feature in a future version?

@jeffdaily
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It would be a great feature. Alas I have barely enough time to keep this project (both the C lib and the python bindings) maintained.

Can you help design the API?

@yipukangda
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Apologies for any limitations in my development skills; despite my willingness, my primary expertise lies in bioinformatics, where I primarily utilize tools for research purposes.

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