From 828edd6bc2ee20f9c90f58bb44374cd49aff45ab Mon Sep 17 00:00:00 2001
From: josura <giorgiolocicero@hotmail.com>
Date: Wed, 16 Oct 2024 14:56:51 +0200
Subject: [PATCH] libraries and modules info information file for loading the
 metabolic network

---
 .../create_input_fluxes_teesside.Rmd          | 21 +++++++++++++++++++
 1 file changed, 21 insertions(+)

diff --git a/scripts/R/temporalSingleCell/create_input_fluxes_teesside.Rmd b/scripts/R/temporalSingleCell/create_input_fluxes_teesside.Rmd
index e69de29..e94043b 100644
--- a/scripts/R/temporalSingleCell/create_input_fluxes_teesside.Rmd
+++ b/scripts/R/temporalSingleCell/create_input_fluxes_teesside.Rmd
@@ -0,0 +1,21 @@
+---
+title: "creating inputs for fluxes"
+---
+
+```{r}
+library(CellChat)
+library(Seurat)
+library(readr)
+library(Matrix)
+#library for transpose function
+library(data.table)
+```
+
+```{r}
+# information about the graph that will be built from the metabolic network
+moduleInfoLocation <- "/home/josura/Projects/ccc/fluxes/scFEA/data/scFEA.M171.mouse.moduleinfo.csv"
+incidenceMatrixLocation <- "/home/josura/Projects/ccc/fluxes/scFEA/data/cmMat_complete_mouse_c70_m168.csv"
+moduleToGeneInfluence <- "/home/josura/Projects/ccc/fluxes/scFEA/data/module_gene_m168.csv"
+# fluxes file generated from scFEA
+        
+```
\ No newline at end of file