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NAMESPACE
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# Generated by roxygen2: do not edit by hand
S3method(FindMarkers,Seurat)
S3method(FindMarkers,default)
S3method(as.data.frame,Seurat)
S3method(autoplot,matrix)
S3method(autoplot,table)
S3method(plot_flowstyle,Seurat)
S3method(plot_flowstyle,data.frame)
S3method(print,concensus.rules)
S3method(print,garnett.list)
S3method(ranger_importances,Seurat)
S3method(ranger_importances,data.frame)
export(FindAllMarkers)
export(FindAllMarkers_ranger.Seurat)
export(FindConservedMarkers)
export(FindMarkers)
export(as.frequency.matrix)
export(as.garnett)
export(autoplot)
export(cross_validate)
export(fit_ctree)
export(get_aliases)
export(get_cluster_mapping)
export(get_concensus_rules)
export(get_genesymbols)
export(ggheatmap_base)
export(is.confusion.matrix)
export(is_gene_membrane)
export(plot_flowstyle)
export(plot_gates)
export(query_biocompare_antibodies)
export(query_biolegend_antibodies)
export(query_cc_antibodies)
export(query_sc_antibodies)
export(ranger_importances)
importFrom(AnnotationDbi,select)
importFrom(GGally,ggpairs)
importFrom(GGally,wrap)
importFrom(MASS,glm.nb)
importFrom(Matrix,rowSums)
importFrom(Matrix,t)
importFrom(ROCR,performance)
importFrom(ROCR,prediction)
importFrom(Seurat,DefaultAssay)
importFrom(Seurat,FetchData)
importFrom(Seurat,FindMarkers)
importFrom(Seurat,GetAssayData)
importFrom(Seurat,Idents)
importFrom(Seurat,VariableFeatures)
importFrom(Seurat,WhichCells)
importFrom(ape,drop.tip)
importFrom(cowplot,plot_grid)
importFrom(future,nbrOfWorkers)
importFrom(future.apply,future_sapply)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,autoplot)
importFrom(ggplot2,geom_point)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,geom_tile)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,labs)
importFrom(ggplot2,theme_bw)
importFrom(grDevices,colorRampPalette)
importFrom(lmtest,lrtest)
importFrom(metap,minimump)
importFrom(methods,is)
importFrom(partykit,as.simpleparty)
importFrom(partykit,ctree)
importFrom(partykit,ctree_control)
importFrom(partykit,info_node)
importFrom(partykit,nodeids)
importFrom(partykit,varimp)
importFrom(pbapply,pblapply)
importFrom(pbapply,pbsapply)
importFrom(purrr,map2_dbl)
importFrom(ranger,importance_pvalues)
importFrom(ranger,ranger)
importFrom(rlang,"%||%")
importFrom(rvest,html_nodes)
importFrom(rvest,html_table)
importFrom(stats,anova)
importFrom(stats,as.formula)
importFrom(stats,coef)
importFrom(stats,dnorm)
importFrom(stats,glm)
importFrom(stats,loess)
importFrom(stats,p.adjust)
importFrom(stats,pchisq)
importFrom(stats,poisson)
importFrom(stats,predict)
importFrom(stats,relevel)
importFrom(stats,rnorm)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(stats,t.test)
importFrom(stats,var)
importFrom(stats,wilcox.test)
importFrom(tidyr,nest)
importFrom(utils,capture.output)
importFrom(utils,setTxtProgressBar)
importFrom(utils,txtProgressBar)
importFrom(viridis,viridis)
importFrom(wrapr,named_map_builder)
importFrom(xml2,read_html)