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plot with specified genomic region bug #1

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Grapefruitsoda opened this issue May 11, 2023 · 1 comment
Open

plot with specified genomic region bug #1

Grapefruitsoda opened this issue May 11, 2023 · 1 comment
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@Grapefruitsoda
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Hello,
Thanks for your R package. It's very useful.

when I write
trackVisProMax(Input_gtf = gtf, Input_bw = bw, query_region = list(query_chr=c('6','18'), query_start=c(85100000,82400000), query_end=c(85200000,82500000)), trans_topN = 1, add_gene_label_layer = T, sample_fill_col = c('#d7191c','#d7191c','#2c7bb6','#2c7bb6'), signal_range_label_params = list(size=2) )

It shows:
Error in data.frame(seqnames = NA, start = NA, end = NA, score = NA, fileName = rep(add_facet_name, : arguments imply differing number of rows: 1, 0
Why?
when I use inputgene,like this(Input_gene = c('Tfap2c','Neurog1')), it works well.
@Grapefruitsoda
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I have solved this issue.
I should check my bw file. to check the chromosome name is '6' or 'chr6'

@junjunlab junjunlab added the invalid This doesn't seem right label May 17, 2023
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@junjunlab @Grapefruitsoda