Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add SAM/BAM input as alternative to fastq #18

Open
okartal opened this issue Nov 19, 2018 · 0 comments
Open

Add SAM/BAM input as alternative to fastq #18

okartal opened this issue Nov 19, 2018 · 0 comments

Comments

@okartal
Copy link

okartal commented Nov 19, 2018

SNAP can take unaligned SAM/BAM files as input, which is nice to handle metadata tags that have been added prior to sequencing. It would be good if BS-Seeker3 would expose this option of SNAP.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant