diff --git a/app/chemiscope-icon.png b/app/chemiscope-icon.png
index 7a623dd0e..a874b0924 100644
Binary files a/app/chemiscope-icon.png and b/app/chemiscope-icon.png differ
diff --git a/app/index.html b/app/index.html
index 11613963c..61edcfe1b 100644
--- a/app/index.html
+++ b/app/index.html
@@ -6,11 +6,24 @@
         <meta name="viewport" content="width=device-width, initial-scale=1" />
         <meta
             name="description"
-            content="Interactive data visualization for materials and molecular databases. Correlate atomic structures and their properties, either online or with a portable app."
+            content="Interactive data visualization for materials and molecular databases. Correlate atomic structures and their properties, either online, in a jupyter notebook, or with a portable app."
         />
 
         <title>Chemiscope</title>
 
+        <script type="text/javascript">
+            // defines available examples (filename:label)
+            var examples = {
+                'Arginine-Dipeptide': 'Arginine Dipeptide',
+                'AlphaMu': 'Dielectric Response',
+                'CSD-1000R': 'Chemical Shieldings',
+                'ROY-GCH': 'Generalized Convex Hull',
+                'Qm7b': 'Qm7b',
+                'Azaphenacenes': 'Azaphenacenes',
+                'Zeolites': 'Zeolites'
+            };        
+        </script>
+
         <!-- analytics -->
         <script defer data-domain="chemiscope.org" src="https://plausible.io/js/plausible.js"></script>
 
@@ -70,24 +83,8 @@
                                 >
                                     <i class="fa fa-images"></i> Examples
                                 </a>
-                                <div class="dropdown-menu" aria-labelledby="examples">
-                                    <span class="dropdown-item clickable" onclick="CHEMISCOPE_APP.loadExample('Arginine-Dipeptide');">
-                                        Arginine-Dipeptide
-                                    </span>
-                                    <span class="dropdown-item clickable" onclick="CHEMISCOPE_APP.loadExample('AlphaMu');">
-                                        Dielectric Response
-                                    </span>
-                                    <span class="dropdown-item clickable" onclick="CHEMISCOPE_APP.loadExample('CSD-1000R');">
-                                        Chemical Shieldings
-                                    </span>
-                                    <span class="dropdown-item clickable" onclick="CHEMISCOPE_APP.loadExample('ROY-GCH');">
-                                        Generalized Convex Hull
-                                    </span>
-                                    <span class="dropdown-item clickable" onclick="CHEMISCOPE_APP.loadExample('Qm7b');"> Qm7b </span>
-                                    <span class="dropdown-item clickable" onclick="CHEMISCOPE_APP.loadExample('Azaphenacenes');">
-                                        Azaphenacenes
-                                    </span>
-                                    <span class="dropdown-item clickable" onclick="CHEMISCOPE_APP.loadExample('Zeolites');"> Zeolites </span>
+                                <div class="dropdown-menu" aria-labelledby="examples" id="examples-dropdown">
+                                    <!-- Menu items will be populated here based on the example dictionary defined above -->
                                 </div>
                             </li>
 
@@ -315,7 +312,31 @@ <h5 style="margin-top: 1em">Visualization state</h5>
             </div>
         </div>
     </body>
+    <script type="text/javascript">
+        // Populate the example menu
+        var dropdownMenu = document.getElementById('examples-dropdown');
+
+        // Loop through the examples object and create menu items
+        Object.keys(examples).forEach(function(file) {
+            var label = examples[file];
+
+            // Create a new span element for each menu item
+            var span = document.createElement('span');
+            span.className = 'dropdown-item clickable';
+
+            // Set the onclick handler
+            span.onclick = function() {
+                CHEMISCOPE_APP.loadExample(file);
+            };
 
+            // Set the display text
+            span.textContent = label;
+
+            // Append the span to the dropdown menu
+            dropdownMenu.appendChild(span);
+        });
+
+    </script>
     <script type="text/javascript">
         /**
          * Create an URL that can be used to load data from the `external` URL
@@ -377,8 +398,12 @@ <h5 style="margin-top: 1em">Visualization state</h5>
 
                     await app.fetchAndLoad(externalDataUrl(external), config);
                 } else {
-                    // default to Arginine-Dipeptide
-                    await app.loadExample('Arginine-Dipeptide');
+                    // loads a random example
+                    var exampleKeys = Object.keys(examples);
+                    var randomIndex = Math.floor(Math.random() * exampleKeys.length);
+                    var randomExampleKey = exampleKeys[randomIndex];
+
+                    await app.loadExample(randomExampleKey);
                 }
             } else {
                 const data = standalone.innerText;
diff --git a/docs/_static/chemiscope-icon-no-name.svg b/docs/_static/chemiscope-icon-no-name.svg
new file mode 100644
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--- /dev/null
+++ b/docs/_static/chemiscope-icon-no-name.svg
@@ -0,0 +1,71 @@
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diff --git a/docs/_static/chemiscope-icon.png b/docs/_static/chemiscope-icon.png
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index 05bfb7e9c..bc8242768 100644
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diff --git a/docs/_static/css/chemiscope.css b/docs/_static/css/chemiscope.css
index bc51a9323..985a074f3 100644
--- a/docs/_static/css/chemiscope.css
+++ b/docs/_static/css/chemiscope.css
@@ -14,3 +14,7 @@ pre {
 .admonition.note a:hover {
     color: #18bc9c;
 }
+
+.sidebar-logo {
+    clip-path: inset(0% round 10px);
+}
diff --git a/docs/requirements.txt b/docs/requirements.txt
index 3a43f19d4..2363ca1dc 100644
--- a/docs/requirements.txt
+++ b/docs/requirements.txt
@@ -1,7 +1,8 @@
 sphinx>=4
-sphinx-bootstrap-theme
+sphinx_rtd_theme   # sphinx theme
 sphinx-argparse-cli
 sphinx-gallery
+furo
 
 # required to be able to import chemiscope in the doc
 numpy
diff --git a/docs/src/conf.py b/docs/src/conf.py
index 0375e9a31..4d2c6efc5 100644
--- a/docs/src/conf.py
+++ b/docs/src/conf.py
@@ -1,7 +1,5 @@
 import os
 
-import sphinx_bootstrap_theme
-
 import chemiscope
 from chemiscope.sphinx import ChemiscopeScraper
 
@@ -57,25 +55,20 @@
 
 # -- Options for HTML output -------------------------------------------------
 
-html_theme = "bootstrap"
-html_theme_path = sphinx_bootstrap_theme.get_html_theme_path()
+html_theme = "furo"
 
 html_theme_options = {
-    "navbar_links": [
-        ("Documentation", "index.html", True),
-    ],
-    "navbar_pagenav": False,
-    "bootswatch_theme": "flatly",
-    "source_link_position": None,
+    "light_css_variables": {
+        "color-background-secondary": "#eaf2ff",
+    },
+    "dark_css_variables": {
+        "color-background-secondary": "#303d4f",
+    },
 }
 
-html_sidebars = {"**": ["sidebar-toc.html", "searchbox.html"]}
-
-# Add any paths that contain custom static files (such as style sheets) here,
-# relative to this directory. They are copied after the builtin static files,
-# so a file named "default.css" will overwrite the builtin "default.css".
 html_static_path = [os.path.join("..", "_static")]
 html_favicon = "../_static/chemiscope-icon.png"
+html_logo = "../_static/chemiscope-icon-no-name.svg"
 
 templates_path = [os.path.join("..", "_templates")]
 
diff --git a/docs/src/index.rst b/docs/src/index.rst
index af0e320e3..1d27c2c8b 100644
--- a/docs/src/index.rst
+++ b/docs/src/index.rst
@@ -47,7 +47,7 @@ What's in this documentation?
 .. toctree::
     :maxdepth: 2
 
-    Chemiscope visualizer <self>
+    Chemiscope <self>
     examples/index
     manual/index
     python/index
diff --git a/package-lock.json b/package-lock.json
index faa9fcca8..90dc7fdc7 100644
--- a/package-lock.json
+++ b/package-lock.json
@@ -19,7 +19,7 @@
         "@types/pako": "^2",
         "@types/plotly.js": "^2.12",
         "@types/tmp": "^0.2.1",
-        "3dmol": "2.3.0",
+        "3dmol": "2.4.2",
         "assert": "^2",
         "bootstrap": "5.2.3",
         "bubleify": "^2.0",
@@ -313,9 +313,9 @@
       }
     },
     "node_modules/@humanwhocodes/retry": {
-      "version": "0.4.0",
-      "resolved": "https://registry.npmjs.org/@humanwhocodes/retry/-/retry-0.4.0.tgz",
-      "integrity": "sha512-xnRgu9DxZbkWak/te3fcytNyp8MTbuiZIaueg2rgEvBuN55n04nwLYLU9TX/VVlusc9L2ZNXi99nUFNkHXtr5g==",
+      "version": "0.4.1",
+      "resolved": "https://registry.npmjs.org/@humanwhocodes/retry/-/retry-0.4.1.tgz",
+      "integrity": "sha512-c7hNEllBlenFTHBky65mhq8WD2kbN9Q6gk0bTk8lSBvc554jpXSkST1iePudpt7+A/AQvuHs9EMqjHDXMY1lrA==",
       "dev": true,
       "license": "Apache-2.0",
       "engines": {
@@ -1705,9 +1705,9 @@
       "license": "MIT"
     },
     "node_modules/@types/qs": {
-      "version": "6.9.16",
-      "resolved": "https://registry.npmjs.org/@types/qs/-/qs-6.9.16.tgz",
-      "integrity": "sha512-7i+zxXdPD0T4cKDuxCUXJ4wHcsJLwENa6Z3dCu8cfCK743OGy5Nu1RmAGqDPsoTDINVEcdXKRvR/zre+P2Ku1A==",
+      "version": "6.9.17",
+      "resolved": "https://registry.npmjs.org/@types/qs/-/qs-6.9.17.tgz",
+      "integrity": "sha512-rX4/bPcfmvxHDv0XjfJELTTr+iB+tn032nPILqHm5wbthUUUuVtNGGqzhya9XUxjTP8Fpr0qYgSZZKxGY++svQ==",
       "dev": true,
       "license": "MIT"
     },
@@ -2072,73 +2072,73 @@
       "license": "ISC"
     },
     "node_modules/@webassemblyjs/ast": {
-      "version": "1.12.1",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/ast/-/ast-1.12.1.tgz",
-      "integrity": "sha512-EKfMUOPRRUTy5UII4qJDGPpqfwjOmZ5jeGFwid9mnoqIFK+e0vqoi1qH56JpmZSzEL53jKnNzScdmftJyG5xWg==",
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+      "resolved": "https://registry.npmjs.org/@webassemblyjs/ast/-/ast-1.14.1.tgz",
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       "dev": true,
       "license": "MIT",
       "dependencies": {
-        "@webassemblyjs/helper-numbers": "1.11.6",
-        "@webassemblyjs/helper-wasm-bytecode": "1.11.6"
+        "@webassemblyjs/helper-numbers": "1.13.2",
+        "@webassemblyjs/helper-wasm-bytecode": "1.13.2"
       }
     },
     "node_modules/@webassemblyjs/floating-point-hex-parser": {
-      "version": "1.11.6",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/floating-point-hex-parser/-/floating-point-hex-parser-1.11.6.tgz",
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-        "@webassemblyjs/floating-point-hex-parser": "1.11.6",
-        "@webassemblyjs/helper-api-error": "1.11.6",
+        "@webassemblyjs/floating-point-hex-parser": "1.13.2",
+        "@webassemblyjs/helper-api-error": "1.13.2",
         "@xtuc/long": "4.2.2"
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       "dev": true,
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     "node_modules/@webassemblyjs/helper-wasm-section": {
-      "version": "1.12.1",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/helper-wasm-section/-/helper-wasm-section-1.12.1.tgz",
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       "dev": true,
       "license": "MIT",
       "dependencies": {
-        "@webassemblyjs/ast": "1.12.1",
-        "@webassemblyjs/helper-buffer": "1.12.1",
-        "@webassemblyjs/helper-wasm-bytecode": "1.11.6",
-        "@webassemblyjs/wasm-gen": "1.12.1"
+        "@webassemblyjs/ast": "1.14.1",
+        "@webassemblyjs/helper-buffer": "1.14.1",
+        "@webassemblyjs/helper-wasm-bytecode": "1.13.2",
+        "@webassemblyjs/wasm-gen": "1.14.1"
       }
     },
     "node_modules/@webassemblyjs/ieee754": {
-      "version": "1.11.6",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/ieee754/-/ieee754-1.11.6.tgz",
-      "integrity": "sha512-LM4p2csPNvbij6U1f19v6WR56QZ8JcHg3QIJTlSwzFcmx6WSORicYj6I63f9yU1kEUtrpG+kjkiIAkevHpDXrg==",
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+      "resolved": "https://registry.npmjs.org/@webassemblyjs/ieee754/-/ieee754-1.13.2.tgz",
+      "integrity": "sha512-4LtOzh58S/5lX4ITKxnAK2USuNEvpdVV9AlgGQb8rJDHaLeHciwG4zlGr0j/SNWlr7x3vO1lDEsuePvtcDNCkw==",
       "dev": true,
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       "dependencies": {
@@ -2146,9 +2146,9 @@
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     },
     "node_modules/@webassemblyjs/leb128": {
-      "version": "1.11.6",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/leb128/-/leb128-1.11.6.tgz",
-      "integrity": "sha512-m7a0FhE67DQXgouf1tbN5XQcdWoNgaAuoULHIfGFIEVKA6tu/edls6XnIlkmS6FrXAquJRPni3ZZKjw6FSPjPQ==",
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+      "resolved": "https://registry.npmjs.org/@webassemblyjs/leb128/-/leb128-1.13.2.tgz",
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       "dev": true,
       "license": "Apache-2.0",
       "dependencies": {
@@ -2156,79 +2156,79 @@
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     },
     "node_modules/@webassemblyjs/utf8": {
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       "license": "MIT"
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     "node_modules/@webassemblyjs/wasm-edit": {
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-        "@webassemblyjs/helper-wasm-section": "1.12.1",
-        "@webassemblyjs/wasm-gen": "1.12.1",
-        "@webassemblyjs/wasm-opt": "1.12.1",
-        "@webassemblyjs/wasm-parser": "1.12.1",
-        "@webassemblyjs/wast-printer": "1.12.1"
+        "@webassemblyjs/ast": "1.14.1",
+        "@webassemblyjs/helper-buffer": "1.14.1",
+        "@webassemblyjs/helper-wasm-bytecode": "1.13.2",
+        "@webassemblyjs/helper-wasm-section": "1.14.1",
+        "@webassemblyjs/wasm-gen": "1.14.1",
+        "@webassemblyjs/wasm-opt": "1.14.1",
+        "@webassemblyjs/wasm-parser": "1.14.1",
+        "@webassemblyjs/wast-printer": "1.14.1"
       }
     },
     "node_modules/@webassemblyjs/wasm-gen": {
-      "version": "1.12.1",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/wasm-gen/-/wasm-gen-1.12.1.tgz",
-      "integrity": "sha512-TDq4Ojh9fcohAw6OIMXqiIcTq5KUXTGRkVxbSo1hQnSy6lAM5GSdfwWeSxpAo0YzgsgF182E/U0mDNhuA0tW7w==",
+      "version": "1.14.1",
+      "resolved": "https://registry.npmjs.org/@webassemblyjs/wasm-gen/-/wasm-gen-1.14.1.tgz",
+      "integrity": "sha512-AmomSIjP8ZbfGQhumkNvgC33AY7qtMCXnN6bL2u2Js4gVCg8fp735aEiMSBbDR7UQIj90n4wKAFUSEd0QN2Ukg==",
       "dev": true,
       "license": "MIT",
       "dependencies": {
-        "@webassemblyjs/ast": "1.12.1",
-        "@webassemblyjs/helper-wasm-bytecode": "1.11.6",
-        "@webassemblyjs/ieee754": "1.11.6",
-        "@webassemblyjs/leb128": "1.11.6",
-        "@webassemblyjs/utf8": "1.11.6"
+        "@webassemblyjs/ast": "1.14.1",
+        "@webassemblyjs/helper-wasm-bytecode": "1.13.2",
+        "@webassemblyjs/ieee754": "1.13.2",
+        "@webassemblyjs/leb128": "1.13.2",
+        "@webassemblyjs/utf8": "1.13.2"
       }
     },
     "node_modules/@webassemblyjs/wasm-opt": {
-      "version": "1.12.1",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/wasm-opt/-/wasm-opt-1.12.1.tgz",
-      "integrity": "sha512-Jg99j/2gG2iaz3hijw857AVYekZe2SAskcqlWIZXjji5WStnOpVoat3gQfT/Q5tb2djnCjBtMocY/Su1GfxPBg==",
+      "version": "1.14.1",
+      "resolved": "https://registry.npmjs.org/@webassemblyjs/wasm-opt/-/wasm-opt-1.14.1.tgz",
+      "integrity": "sha512-PTcKLUNvBqnY2U6E5bdOQcSM+oVP/PmrDY9NzowJjislEjwP/C4an2303MCVS2Mg9d3AJpIGdUFIQQWbPds0Sw==",
       "dev": true,
       "license": "MIT",
       "dependencies": {
-        "@webassemblyjs/ast": "1.12.1",
-        "@webassemblyjs/helper-buffer": "1.12.1",
-        "@webassemblyjs/wasm-gen": "1.12.1",
-        "@webassemblyjs/wasm-parser": "1.12.1"
+        "@webassemblyjs/ast": "1.14.1",
+        "@webassemblyjs/helper-buffer": "1.14.1",
+        "@webassemblyjs/wasm-gen": "1.14.1",
+        "@webassemblyjs/wasm-parser": "1.14.1"
       }
     },
     "node_modules/@webassemblyjs/wasm-parser": {
-      "version": "1.12.1",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/wasm-parser/-/wasm-parser-1.12.1.tgz",
-      "integrity": "sha512-xikIi7c2FHXysxXe3COrVUPSheuBtpcfhbpFj4gmu7KRLYOzANztwUU0IbsqvMqzuNK2+glRGWCEqZo1WCLyAQ==",
+      "version": "1.14.1",
+      "resolved": "https://registry.npmjs.org/@webassemblyjs/wasm-parser/-/wasm-parser-1.14.1.tgz",
+      "integrity": "sha512-JLBl+KZ0R5qB7mCnud/yyX08jWFw5MsoalJ1pQ4EdFlgj9VdXKGuENGsiCIjegI1W7p91rUlcB/LB5yRJKNTcQ==",
       "dev": true,
       "license": "MIT",
       "dependencies": {
-        "@webassemblyjs/ast": "1.12.1",
-        "@webassemblyjs/helper-api-error": "1.11.6",
-        "@webassemblyjs/helper-wasm-bytecode": "1.11.6",
-        "@webassemblyjs/ieee754": "1.11.6",
-        "@webassemblyjs/leb128": "1.11.6",
-        "@webassemblyjs/utf8": "1.11.6"
+        "@webassemblyjs/ast": "1.14.1",
+        "@webassemblyjs/helper-api-error": "1.13.2",
+        "@webassemblyjs/helper-wasm-bytecode": "1.13.2",
+        "@webassemblyjs/ieee754": "1.13.2",
+        "@webassemblyjs/leb128": "1.13.2",
+        "@webassemblyjs/utf8": "1.13.2"
       }
     },
     "node_modules/@webassemblyjs/wast-printer": {
-      "version": "1.12.1",
-      "resolved": "https://registry.npmjs.org/@webassemblyjs/wast-printer/-/wast-printer-1.12.1.tgz",
-      "integrity": "sha512-+X4WAlOisVWQMikjbcvY2e0rwPsKQ9F688lksZhBcPycBBuii3O7m8FACbDMWDojpAqvjIncrG8J0XHKyQfVeA==",
+      "version": "1.14.1",
+      "resolved": "https://registry.npmjs.org/@webassemblyjs/wast-printer/-/wast-printer-1.14.1.tgz",
+      "integrity": "sha512-kPSSXE6De1XOR820C90RIo2ogvZG+c3KiHzqUoO/F34Y2shGzesfqv7o57xrxovZJH/MetF5UjroJ/R/3isoiw==",
       "dev": true,
       "license": "MIT",
       "dependencies": {
-        "@webassemblyjs/ast": "1.12.1",
+        "@webassemblyjs/ast": "1.14.1",
         "@xtuc/long": "4.2.2"
       }
     },
@@ -2294,9 +2294,9 @@
       "license": "Apache-2.0"
     },
     "node_modules/3dmol": {
-      "version": "2.3.0",
-      "resolved": "https://registry.npmjs.org/3dmol/-/3dmol-2.3.0.tgz",
-      "integrity": "sha512-aRRaAtgQiel7Vl+9C+MJ4pUKlMyLpbQW9wYxG0TXUSX4NSb0kDdGNkMbZuR/Wpqtlp46D7EWy5gj8TeIJ2sXQA==",
+      "version": "2.4.2",
+      "resolved": "https://registry.npmjs.org/3dmol/-/3dmol-2.4.2.tgz",
+      "integrity": "sha512-7R6uFaF5++s9EpO+R0a3bs6igi5idI+sgrVhtozaZlOGHg6oourYkAlAwYxWRaeBGlNcAd+oEIhbhJYhNxGyZA==",
       "dev": true,
       "license": "BSD-3-Clause",
       "dependencies": {
@@ -2980,9 +2980,9 @@
       }
     },
     "node_modules/caniuse-lite": {
-      "version": "1.0.30001677",
-      "resolved": "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001677.tgz",
-      "integrity": "sha512-fmfjsOlJUpMWu+mAAtZZZHz7UEwsUxIIvu1TJfO1HqFQvB/B+ii0xr9B5HpbZY/mC4XZ8SvjHJqtAY6pDPQEog==",
+      "version": "1.0.30001679",
+      "resolved": "https://registry.npmjs.org/caniuse-lite/-/caniuse-lite-1.0.30001679.tgz",
+      "integrity": "sha512-j2YqID/YwpLnKzCmBOS4tlZdWprXm3ZmQLBH9ZBXFOhoxLA46fwyBvx6toCBWBmnuwUY/qB3kEU6gFx8qgCroA==",
       "dev": true,
       "funding": [
         {
@@ -3472,9 +3472,9 @@
       "license": "MIT"
     },
     "node_modules/cross-spawn": {
-      "version": "7.0.3",
-      "resolved": "https://registry.npmjs.org/cross-spawn/-/cross-spawn-7.0.3.tgz",
-      "integrity": "sha512-iRDPJKUPVEND7dHPO8rkbOnPpyDygcDFtWjpeWNCgy8WP2rXcxXL8TskReQl6OrB2G7+UJrags1q15Fudc7G6w==",
+      "version": "7.0.5",
+      "resolved": "https://registry.npmjs.org/cross-spawn/-/cross-spawn-7.0.5.tgz",
+      "integrity": "sha512-ZVJrKKYunU38/76t0RMOulHOnUcbU9GbpWKAOZ0mhjr7CX6FVrH+4FrAapSOekrgFQ3f/8gwMEuIft0aKq6Hug==",
       "dev": true,
       "license": "MIT",
       "dependencies": {
@@ -4096,9 +4096,9 @@
       "license": "MIT"
     },
     "node_modules/electron-to-chromium": {
-      "version": "1.5.51",
-      "resolved": "https://registry.npmjs.org/electron-to-chromium/-/electron-to-chromium-1.5.51.tgz",
-      "integrity": "sha512-kKeWV57KSS8jH4alKt/jKnvHPmJgBxXzGUSbMd4eQF+iOsVPl7bz2KUmu6eo80eMP8wVioTfTyTzdMgM15WXNg==",
+      "version": "1.5.55",
+      "resolved": "https://registry.npmjs.org/electron-to-chromium/-/electron-to-chromium-1.5.55.tgz",
+      "integrity": "sha512-6maZ2ASDOTBtjt9FhqYPRnbvKU5tjG0IN9SztUOWYw2AzNDNpKJYLJmlK0/En4Hs/aiWnB+JZ+gW19PIGszgKg==",
       "dev": true,
       "license": "ISC"
     },
diff --git a/package.json b/package.json
index 4c349de8c..920b20fd7 100644
--- a/package.json
+++ b/package.json
@@ -26,7 +26,7 @@
     "url": "git+https://github.com/lab-cosmo/chemiscope.git"
   },
   "scripts": {
-    "test": "eslint src && prettier --check src",
+    "test": "eslint src python/jupyter/src && prettier --check src python/jupyter/src",
     "build": "rimraf dist && webpack --mode production --config webpack.config.ts && npm run merge-dts",
     "build:nbextension": "webpack --mode production --config python/webpack.config.nbextension.ts",
     "build:labextension": "npm run build && jupyter labextension build .",
@@ -50,7 +50,7 @@
     "@types/pako": "^2",
     "@types/plotly.js": "^2.12",
     "@types/tmp": "^0.2.1",
-    "3dmol": "2.3.0",
+    "3dmol": "2.4.2",
     "assert": "^2",
     "bootstrap": "5.2.3",
     "bubleify": "^2.0",
diff --git a/pyproject.toml b/pyproject.toml
index ee9298a22..9e6e86308 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -77,6 +77,6 @@ explore = [
 ]
 
 metatensor = [
-    "metatensor-operations >=0.2,<0.3",
-    "metatensor-torch >=0.5,<0.6"
+    "metatensor-operations >=0.3,<0.4",
+    "metatensor-torch >=0.6,<0.7"
 ]
diff --git a/python/chemiscope/jupyter.py b/python/chemiscope/jupyter.py
index fa7d91e2a..297ccf12b 100644
--- a/python/chemiscope/jupyter.py
+++ b/python/chemiscope/jupyter.py
@@ -277,7 +277,6 @@ def show(
         # and error is only visible in the console
         if len(dict_input["properties"]) < 2:
             raise ValueError("Need at least two properties to visualize a map widget")
-
     return widget_class(dict_input, has_metadata=has_metadata)
 
 
diff --git a/python/examples/.gitignore b/python/examples/.gitignore
index a4097831c..8bd927b25 100644
--- a/python/examples/.gitignore
+++ b/python/examples/.gitignore
@@ -1 +1,2 @@
 *.json.gz
+model-exported.pt
diff --git a/python/examples/8-explore-with-metatensor.py b/python/examples/8-explore-with-metatensor.py
index 135744110..651e763c4 100644
--- a/python/examples/8-explore-with-metatensor.py
+++ b/python/examples/8-explore-with-metatensor.py
@@ -96,7 +96,9 @@ def __init__(self, cutoff: float, max_k: int):
         self.cutoff = cutoff
         self.max_k = max_k
 
-        self._neighbors_options = NeighborListOptions(cutoff=cutoff, full_list=True)
+        self._neighbors_options = NeighborListOptions(
+            cutoff=cutoff, full_list=True, strict=True
+        )
 
     def requested_neighbor_lists(self) -> List[NeighborListOptions]:
         # our model requires a neighbor list, that will be computed and provided to it
@@ -198,12 +200,13 @@ def forward(
         "features": ModelOutput(per_atom=True),
     },
     atomic_types=[6],
+    length_unit="angstrom",
     interaction_range=0.0,
     supported_devices=["cpu"],
     dtype="float64",
 )
 
-model = MetatensorAtomisticModel(model.eval(), metadata, capabilities)
+mta_model = MetatensorAtomisticModel(model.eval(), metadata, capabilities)
 
 # %%
 #
@@ -215,9 +218,17 @@ def forward(
 # Once the model is fully defined, we can use it with
 # :py:func:`chemiscope.metatensor_featurizer`:
 
-featurizer = chemiscope.metatensor_featurizer(model, check_consistency=True)
+featurizer = chemiscope.metatensor_featurizer(mta_model, check_consistency=True)
 chemiscope.explore(
     frames=frames,
     featurize=featurizer,
     environments=chemiscope.all_atomic_environments(frames),
 )
+
+# %%
+# The metatensor model can also be easily exported,
+# to be shared with collaborators for use in their
+# visualization workflows
+
+mta_model.save("model-exported.pt")
+# %%
diff --git a/python/examples/model.pt b/python/examples/model.pt
index 8739fb63c..34c1a067b 100644
Binary files a/python/examples/model.pt and b/python/examples/model.pt differ
diff --git a/python/jupyter/src/widget.ts b/python/jupyter/src/widget.ts
index 49628733f..5280aaf8b 100644
--- a/python/jupyter/src/widget.ts
+++ b/python/jupyter/src/widget.ts
@@ -144,6 +144,7 @@ export class ChemiscopeView extends ChemiscopeBaseView {
                 // and set them to the initial value right now
                 this._updatePythonSettings();
             })
+            // eslint-disable-next-line @typescript-eslint/use-unknown-in-catch-callback-variable
             .catch((e: Error) => {
                 // eslint-disable-next-line no-console
                 console.error(e);
@@ -225,6 +226,7 @@ export class StructureView extends ChemiscopeBaseView {
                 // and set them to the initial value right now
                 this._updatePythonSettings();
             })
+            // eslint-disable-next-line @typescript-eslint/use-unknown-in-catch-callback-variable
             .catch((e: Error) => {
                 // eslint-disable-next-line no-console
                 console.error(e);
@@ -306,6 +308,7 @@ export class MapView extends ChemiscopeBaseView {
                 // and set them to the initial value right now
                 this._updatePythonSettings();
             })
+            // eslint-disable-next-line @typescript-eslint/use-unknown-in-catch-callback-variable
             .catch((e: Error) => {
                 // eslint-disable-next-line no-console
                 console.error(e);
diff --git a/src/map/options.ts b/src/map/options.ts
index 19e5963f6..4c09f9b2c 100644
--- a/src/map/options.ts
+++ b/src/map/options.ts
@@ -99,17 +99,16 @@ export class MapOptions extends OptionsGroup {
         super();
 
         // Setup axes
-        const propertiesName = Object.keys(properties);
-        if (propertiesName.length < 2) {
+        const propertiesNames = Object.keys(properties);
+        if (propertiesNames.length < 2) {
             throw new Error(
                 'Cannot show a map because the dataset contains fewer than two properties.'
             );
         }
-        this.x = new AxisOptions(propertiesName);
-        this.y = new AxisOptions(propertiesName);
+        this.x = new AxisOptions(propertiesNames);
+        this.y = new AxisOptions(propertiesNames);
         // For z and color '' is a valid value
-        this.z = new AxisOptions(propertiesName.concat(['']));
-
+        this.z = new AxisOptions(propertiesNames.concat(['']));
         // Initialise symbol
         this.symbol = new HTMLOption('string', '');
         const validSymbols = [''];
@@ -131,7 +130,7 @@ export class MapOptions extends OptionsGroup {
             min: new HTMLOption('number', NaN),
             max: new HTMLOption('number', NaN),
         };
-        this.color.property.validate = optionValidator(propertiesName.concat(['']), 'color');
+        this.color.property.validate = optionValidator(propertiesNames.concat(['']), 'color');
         this.color.mode.validate = optionValidator(['linear', 'log', 'sqrt', 'inverse'], 'mode');
 
         // Initialise size
@@ -140,7 +139,7 @@ export class MapOptions extends OptionsGroup {
             mode: new HTMLOption('string', 'linear'),
             property: new HTMLOption('string', ''),
         };
-        this.size.property.validate = optionValidator(propertiesName.concat(['']), 'size');
+        this.size.property.validate = optionValidator(propertiesNames.concat(['']), 'size');
         this.size.factor.validate = (value) => {
             if (value < 1 || value > 100) {
                 throw Error(`size factor must be between 0 and 100, got ${value}`);
@@ -156,11 +155,11 @@ export class MapOptions extends OptionsGroup {
         this.joinPoints = new HTMLOption('boolean', false);
 
         // Setup default values
-        this.x.property.value = propertiesName[0];
-        this.y.property.value = propertiesName[1];
+        this.x.property.value = propertiesNames[0];
+        this.y.property.value = propertiesNames[1];
         this.z.property.value = '';
-        if (propertiesName.length > 2) {
-            this.color.property.value = propertiesName[2];
+        if (propertiesNames.length > 2) {
+            this.color.property.value = propertiesNames[2];
         } else {
             this.color.property.value = '';
         }
diff --git a/src/options.ts b/src/options.ts
index 5681cfce9..3db9c0395 100644
--- a/src/options.ts
+++ b/src/options.ts
@@ -1,3 +1,5 @@
+/* eslint-disable @typescript-eslint/no-unsafe-member-access */
+/* eslint-disable @typescript-eslint/no-unsafe-assignment */
 /**
  * @packageDocumentation
  * @module utils
@@ -152,7 +154,7 @@ export class HTMLOption<T extends OptionsType> {
                     option.selected = values.includes(option.value);
                 }
             } else {
-                // eslint-disable-next-line @typescript-eslint/no-unsafe-member-access, @typescript-eslint/no-explicit-any
+                // eslint-disable-next-line @typescript-eslint/no-explicit-any
                 (bound.element as any)[bound.attribute] = this._value;
             }
         }
@@ -196,18 +198,17 @@ export class HTMLOption<T extends OptionsType> {
             };
             // also initializes the state of the option list
             const values = (this._value as string).split(',');
-            // eslint-disable-next-line @typescript-eslint/no-explicit-any, @typescript-eslint/no-unsafe-member-access
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
             for (const option of (element as any).options) {
-                // eslint-disable-next-line @typescript-eslint/no-unsafe-member-access
                 option.selected = values.includes(option.value as string);
             }
         } else {
             listener = (event: Event) => {
                 assert(event.target !== null);
-                // eslint-disable-next-line @typescript-eslint/no-unsafe-member-access, @typescript-eslint/no-unsafe-call, @typescript-eslint/no-explicit-any, @typescript-eslint/no-unsafe-argument
+                // eslint-disable-next-line @typescript-eslint/no-unsafe-call, @typescript-eslint/no-explicit-any, @typescript-eslint/no-unsafe-argument
                 this._update((event.target as any)[attribute].toString(), 'DOM');
             };
-            // eslint-disable-next-line @typescript-eslint/no-explicit-any, @typescript-eslint/no-unsafe-member-access
+            // eslint-disable-next-line @typescript-eslint/no-explicit-any
             (element as any)[attribute] = this._value;
         }
         element.addEventListener('change', listener);
@@ -323,26 +324,24 @@ export abstract class OptionsGroup {
      *         values of all settings.
      */
     public saveSettings(): Settings {
-        const settings = {};
-        /* eslint-disable */
+        const settings: Settings = {};
         this.foreachOption((keys, option) => {
             assert(keys.length >= 1);
             const value = option.value;
 
             // Save property value if valid
             if (value !== undefined || value !== null || !Number.isNaN(value)) {
-                let root = settings as any;
+                let root = settings;
                 for (const key of keys.slice(0, keys.length - 1)) {
                     if (!(key in root)) {
                         root[key] = {};
                     }
-                    root = root[key];
+                    root = root[key] as unknown as Settings;
                 }
                 const lastKey = keys[keys.length - 1];
                 root[lastKey] = value;
             }
         });
-        /* eslint-enable */
         return settings;
     }
 
@@ -355,11 +354,9 @@ export abstract class OptionsGroup {
     public applySettings(settings: Settings): void {
         // make a copy of the settings since we will be changing it below
         const copy = JSON.parse(JSON.stringify(settings)) as Settings;
-
         this.foreachOption((keys, option) => {
-            /* eslint-disable */
             assert(keys.length >= 1);
-            let root = copy as any;
+            let root = copy;
             let parent;
             for (const key of keys.slice(0, keys.length - 1)) {
                 if (!(key in root)) {
@@ -367,15 +364,19 @@ export abstract class OptionsGroup {
                     return;
                 }
                 parent = root;
-                root = root[key];
+                root = root[key] as unknown as Settings;
             }
             const lastKey = keys[keys.length - 1];
 
             if (lastKey in root) {
-                const value = root[lastKey];
+                let value = root[lastKey];
 
+                // convert null values for numeric options to NaN (useful for axis range)
+                if (typeof option.value === 'number' && value === null) {
+                    value = NaN;
+                }
                 // send warning if the value is invalid and omit applying it
-                if (value === undefined || value === null || Number.isNaN(value)) {
+                if (value === undefined || value === null) {
                     sendWarning(`ignored setting '${lastKey}' with invalid value '${value}'`);
                     return;
                 }
@@ -384,14 +385,15 @@ export abstract class OptionsGroup {
 
                 // remove used keys from the settings to be able to warn on
                 // unused keys
+                // eslint-disable-next-line @typescript-eslint/no-dynamic-delete
                 delete root[lastKey];
                 if (parent !== undefined && Object.keys(root).length === 0) {
                     // if we removed all keys from a sub-object, remove the sub-object
                     assert(keys.length >= 2);
+                    // eslint-disable-next-line @typescript-eslint/no-dynamic-delete
                     delete parent[keys[keys.length - 2]];
                 }
             }
-            /* eslint-enable */
         });
         if (Object.keys(copy).length !== 0) {
             sendWarning(`ignored unknown settings '${JSON.stringify(copy)}'`);
diff --git a/src/structure/viewer.ts b/src/structure/viewer.ts
index ffef44a50..3b417d936 100644
--- a/src/structure/viewer.ts
+++ b/src/structure/viewer.ts
@@ -587,7 +587,9 @@ export class MoleculeViewer {
             return;
         }
 
-        const active = this._environments.filter((e) => e !== undefined).map((e) => e.center);
+        const active = this._environments
+            .filter((e): e is Environment => e !== undefined)
+            .map((e) => e.center);
 
         // resets clickable and hoverable state interactions
         for (const atom of this._viewer.selectedAtoms({})) {
@@ -806,6 +808,9 @@ export class MoleculeViewer {
                 return;
             }
 
+            // resets shapes before checking if there are shapes to add
+            this._resetShapes();
+
             this._updateStyle();
             this._viewer.render();
         });
@@ -1111,7 +1116,6 @@ export class MoleculeViewer {
         if (this._current === undefined) {
             return;
         }
-
         if (this._options.shape.value !== '') {
             this._addShapes();
         }
@@ -1174,13 +1178,11 @@ export class MoleculeViewer {
         this._viewer.render();
     }
 
-    private _addShapes(): void {
+    private _resetShapes(): void {
+        // removes shapes and adds the cell and axes if required
         if (this._current === undefined) {
             return;
         }
-        if (this._options.shape.value === '') {
-            return;
-        }
 
         this._viewer.removeAllShapes();
 
@@ -1196,6 +1198,17 @@ export class MoleculeViewer {
 
         // removeAllShapes also removes the axes, so let's add them back
         this._addAxes(this._options.axes.value);
+    }
+
+    private _addShapes(): void {
+        if (this._current === undefined) {
+            return;
+        }
+        if (this._options.shape.value === '') {
+            return;
+        }
+
+        this._resetShapes();
 
         assert(this._current.atomLabels.length === 0);