build_container_v08.sh

#!/bin/bash
#SBATCH --job-name=build_container  
#SBATCH --mail-type=END,FAIL          
#SBATCH --mail-user=skylastolte4444@ufl.edu  
#SBATCH --nodes=1
#SBATCH --cpus-per-task=1
#SBATCH --mem-per-cpu=30gb
#SBATCH --time=08:00:00
#SBATCH --output=%x.%j.out
date;hostname;pwd

module load singularity

# build a Singularity sandbox container (container in a writable directory) from MONAI Core docker image
singularity build --sandbox /red/nvidia-ai/SkylarStolte/monaicore08/ docker://projectmonai/monai:0.8.1
# check nsys environment
singularity exec --nv /red/nvidia-ai/SkylarStolte/monaicore08 nsys status -e