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write_output.f90
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write_output.f90
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subroutine write_output
use global_variables
use ezcdf
implicit none
integer :: ierr, ncid
! Same convention as in VMEC:
! Prefix vn_ indicates the variable name used in the .nc file.
character(len=*), parameter :: &
vn_nfp = "nfp", &
vn_geometry_option_plasma = "geometry_option_plasma", &
vn_geometry_option_middle = "geometry_option_middle", &
vn_geometry_option_outer = "geometry_option_outer", &
vn_nu_plasma = "nu_plasma", &
vn_nv_plasma = "nv_plasma", &
vn_nvl_plasma = "nvl_plasma", &
vn_nu_middle = "nu_middle", &
vn_nv_middle = "nv_middle", &
vn_nvl_middle = "nvl_middle", &
vn_nu_outer = "nu_outer", &
vn_nv_outer = "nv_outer", &
vn_nvl_outer = "nvl_outer", &
vn_u_plasma = "u_plasma", &
vn_v_plasma = "v_plasma", &
vn_vl_plasma = "vl_plasma", &
vn_u_middle = "u_middle", &
vn_v_middle = "v_middle", &
vn_vl_middle = "vl_middle", &
vn_u_outer = "u_outer", &
vn_v_outer = "v_outer", &
vn_vl_outer = "vl_outer", &
vn_r_plasma = "r_plasma", &
vn_r_middle = "r_middle", &
vn_r_outer = "r_outer", &
vn_a_plasma = "a_plasma", &
vn_a_middle = "a_middle", &
vn_a_outer = "a_outer", &
vn_R0_plasma = "R0_plasma", &
vn_R0_middle = "R0_middle", &
vn_R0_outer = "R0_outer", &
vn_drdu_plasma = "drdu_plasma", &
vn_drdu_middle = "drdu_middle", &
vn_drdu_outer = "drdu_outer", &
vn_drdv_plasma = "drdv_plasma", &
vn_drdv_middle = "drdv_middle", &
vn_drdv_outer = "drdv_outer", &
vn_d2rdu2_middle = "d2rdu2_middle", &
vn_d2rdudv_middle = "d2rdudv_middle", &
vn_d2rdv2_middle = "d2rdv2_middle", &
vn_normal_plasma = "normal_plasma", &
vn_normal_middle = "normal_middle", &
vn_normal_outer = "normal_outer", &
vn_norm_normal_plasma = "norm_normal_plasma", &
vn_norm_normal_middle = "norm_normal_middle", &
vn_norm_normal_outer = "norm_normal_outer", &
vn_mpol_plasma = "mpol_plasma", &
vn_ntor_plasma = "ntor_plasma", &
vn_mnmax_plasma = "mnmax_plasma", &
vn_num_basis_functions_plasma = "num_basis_functions_plasma", &
vn_basis_functions_plasma = "basis_functions_plasma", &
vn_xm_plasma = "xm_plasma", &
vn_xn_plasma = "xn_plasma", &
vn_mpol_middle = "mpol_middle", &
vn_ntor_middle = "ntor_middle", &
vn_mnmax_middle = "mnmax_middle", &
vn_num_basis_functions_middle = "num_basis_functions_middle", &
vn_basis_functions_middle = "basis_functions_middle", &
vn_xm_middle = "xm_middle", &
vn_xn_middle = "xn_middle", &
vn_mpol_outer = "mpol_outer", &
vn_ntor_outer = "ntor_outer", &
vn_mnmax_outer = "mnmax_outer", &
vn_num_basis_functions_outer = "num_basis_functions_outer", &
vn_basis_functions_outer = "basis_functions_outer", &
vn_xm_outer = "xm_outer", &
vn_xn_outer = "xn_outer", &
vn_symmetry_option = "symmetry_option", &
vn_inductance_plasma_outer = "inductance_plasma_outer", &
vn_inductance_middle_outer = "inductance_middle_outer", &
vn_inductance_plasma_middle = "inductance_plasma_middle", &
vn_n_singular_values_inductance_plasma_outer = "n_singular_values_inductance_plasma_outer", &
vn_n_singular_values_inductance_middle_outer = "n_singular_values_inductance_middle_outer", &
vn_n_singular_values_inductance_plasma_middle = "n_singular_values_inductance_plasma_middle", &
vn_n_singular_values_transferMatrix = "n_singular_values_transferMatrix", &
vn_svd_s_inductance_plasma_outer = "svd_s_inductance_plasma_outer", &
vn_svd_s_inductance_middle_outer = "svd_s_inductance_middle_outer", &
vn_svd_s_inductance_plasma_middle = "svd_s_inductance_plasma_middle", &
vn_pseudoinverse_thresholds = "pseudoinverse_thresholds", &
vn_n_pseudoinverse_thresholds = "n_pseudoinverse_thresholds", &
vn_n_singular_values_retained = "n_singular_values_retained", &
vn_svd_s_transferMatrix = "svd_s_transferMatrix", &
vn_svd_u_transferMatrix = "svd_u_transferMatrix", &
vn_svd_v_transferMatrix = "svd_v_transferMatrix", &
vn_svd_u_transferMatrix_uv = "svd_u_transferMatrix_uv", &
vn_svd_v_transferMatrix_uv = "svd_v_transferMatrix_uv", &
vn_n_singular_vectors_to_save = "n_singular_vectors_to_save", &
vn_totalTime = "totalTime", &
vn_basis_option_plasma = "basis_option_plasma", &
vn_basis_option_middle = "basis_option_middle", &
vn_basis_option_outer = "basis_option_outer", &
vn_area_plasma = "area_plasma", &
vn_area_middle = "area_middle", &
vn_area_outer = "area_outer", &
vn_check_orthogonality = "check_orthogonality", &
vn_should_be_identity_plasma = "should_be_identity_plasma", &
vn_should_be_identity_middle = "should_be_identity_middle", &
vn_should_be_identity_outer = "should_be_identity_outer", &
vn_svd_u_inductance_plasma_middle = "svd_u_inductance_plasma_middle", &
vn_svd_v_inductance_plasma_middle = "svd_v_inductance_plasma_middle", &
vn_svd_u_inductance_plasma_middle_uv = "svd_u_inductance_plasma_middle_uv", &
vn_svd_v_inductance_plasma_middle_uv = "svd_v_inductance_plasma_middle_uv", &
vn_svd_u_inductance_plasma_middle_dominant_m = "svd_u_inductance_plasma_middle_dominant_m", &
vn_svd_u_inductance_plasma_middle_dominant_n = "svd_u_inductance_plasma_middle_dominant_n", &
vn_svd_u_transferMatrix_dominant_m = "svd_u_transferMatrix_dominant_m", &
vn_svd_u_transferMatrix_dominant_n = "svd_u_transferMatrix_dominant_n", &
vn_Merkel_Kmn = "Merkel_Kmn", &
vn_overlap_plasma = "overlap_plasma", &
vn_overlap_middle = "overlap_middle", &
vn_Bnormal_from_1_over_R_field = "Bnormal_from_1_over_R_field", &
vn_Bnormal_from_1_over_R_field_uv = "Bnormal_from_1_over_R_field_uv", &
vn_Bnormal_from_1_over_R_field_inductance = "Bnormal_from_1_over_R_field_inductance", &
vn_Bnormal_from_1_over_R_field_transfer = "Bnormal_from_1_over_R_field_transfer", &
vn_Bnormal_from_const_v_coils = "Bnormal_from_const_v_coils", &
vn_Bnormal_from_const_v_coils_uv = "Bnormal_from_const_v_coils_uv", &
vn_Bnormal_from_const_v_coils_inductance = "Bnormal_from_const_v_coils_inductance", &
vn_Bnormal_from_const_v_coils_transfer = "Bnormal_from_const_v_coils_transfer", &
vn_Bnormal_from_plasma_current = "Bnormal_from_plasma_current", &
vn_Bnormal_from_plasma_current_uv = "Bnormal_from_plasma_current_uv", &
vn_Bnormal_from_plasma_current_inductance = "Bnormal_from_plasma_current_inductance", &
vn_Bnormal_from_plasma_current_transfer = "Bnormal_from_plasma_current_transfer", &
vn_net_poloidal_current_Amperes = "net_poloidal_current_Amperes", &
vn_curpol = "curpol"
! Arrays with dimension 1:
character(len=*), parameter, dimension(1) :: &
nu_plasma_dim = (/'nu_plasma'/), &
nv_plasma_dim = (/'nv_plasma'/), &
nvl_plasma_dim = (/'nvl_plasma'/), &
nu_middle_dim = (/'nu_middle'/), &
nv_middle_dim = (/'nv_middle'/), &
nvl_middle_dim = (/'nvl_middle'/), &
nu_outer_dim = (/'nu_outer'/), &
nv_outer_dim = (/'nv_outer'/), &
nvl_outer_dim = (/'nvl_outer'/), &
mnmax_plasma_dim = (/'mnmax_plasma'/), &
mnmax_middle_dim = (/'mnmax_middle'/), &
mnmax_outer_dim = (/'mnmax_outer'/), &
n_singular_values_inductance_plasma_outer_dim = (/'n_singular_values_inductance_plasma_outer'/), &
n_singular_values_inductance_middle_outer_dim = (/'n_singular_values_inductance_middle_outer'/), &
n_singular_values_inductance_plasma_middle_dim = (/'n_singular_values_inductance_plasma_middle'/), &
n_pseudoinverse_thresholds_dim = (/'n_pseudoinverse_thresholds'/), &
basis_plasma_dim = (/'num_basis_functions_plasma'/)
! Arrays with dimension 2:
! The form of the array declarations here is inspired by
! http://stackoverflow.com/questions/21552430/gfortran-does-not-allow-character-arrays-with-varying-component-lengths
character(len=*), parameter, dimension(2) :: &
u_v_plasma_dim = (/ character(len=50) :: 'nu_plasma','nv_plasma'/), &
u_vl_plasma_dim = (/ character(len=50) :: 'nu_plasma','nvl_plasma'/), &
u_vl_middle_dim = (/ character(len=50) :: 'nu_middle','nvl_middle'/), &
u_vl_outer_dim = (/ character(len=50) :: 'nu_outer','nvl_outer'/), &
basis_plasma_outer_dim = (/ character(len=50) :: 'num_basis_functions_plasma','num_basis_functions_outer'/), &
basis_middle_outer_dim = (/ character(len=50) :: 'num_basis_functions_middle','num_basis_functions_outer'/), &
basis_plasma_middle_dim = (/ character(len=50) :: 'num_basis_functions_plasma','num_basis_functions_middle'/), &
n_singular_values_thresholds_dim = &
(/ character(len=50) :: 'n_singular_values_transferMatrix','n_pseudoinverse_thresholds'/), &
basis_basis_plasma_dim = (/ character(len=50) :: 'num_basis_functions_plasma','num_basis_functions_plasma'/), &
basis_basis_middle_dim = (/ character(len=50) :: 'num_basis_functions_middle','num_basis_functions_middle'/), &
basis_basis_outer_dim = (/ character(len=50) :: 'num_basis_functions_outer','num_basis_functions_outer'/), &
uv_basis_plasma_dim = (/ character(len=50) :: 'nu_nv_plasma','num_basis_functions_plasma'/), &
uv_basis_middle_dim = (/ character(len=50) :: 'nu_nv_middle','num_basis_functions_middle'/), &
uv_basis_outer_dim = (/ character(len=50) :: 'nu_nv_outer', 'num_basis_functions_outer'/), &
basis_plasma_nsave_dim = (/ character(len=50) :: 'num_basis_functions_plasma','n_singular_vectors_to_save'/), &
basis_middle_nsave_dim = (/ character(len=50) :: 'num_basis_functions_middle','n_singular_vectors_to_save'/), &
uv_plasma_nsave_dim = (/ character(len=50) :: 'nu_nv_plasma','n_singular_vectors_to_save'/), &
uv_middle_nsave_dim = (/ character(len=50) :: 'nu_nv_middle','n_singular_vectors_to_save'/), &
basis_plasma_thresholds_dim = (/ character(len=50) :: 'num_basis_functions_plasma','n_pseudoinverse_thresholds'/), &
uv_middle_mnmax_outer_dim = (/ character(len=50) :: 'nu_nv_middle','mnmax_outer'/)
! uvl_plasma_dim = (/'nvl_plasma','nu_plasma'/)
! u_v_uprime_vprime_plasma_dim = (/'nu_nv_plasma','nu_nv_outer'/),&
! u_v_uprime_vprime_middle_dim = (/'nu_nv_middle','nu_nv_outer'/), &
! Arrays with dimension 3:
character(len=*), parameter, dimension(3) :: &
xyz_u_vl_plasma_dim = (/ character(len=50) :: 'xyz','nu_plasma','nvl_plasma'/), &
xyz_u_vl_middle_dim = (/ character(len=50) :: 'xyz','nu_middle','nvl_middle'/), &
xyz_u_vl_outer_dim = (/ character(len=50) :: 'xyz','nu_outer', 'nvl_outer'/), &
basis_plasma_nsave_thresholds_dim = (/ character(len=50) :: 'num_basis_functions_plasma','n_singular_vectors_to_save','n_pseudoinverse_thresholds'/), &
basis_middle_nsave_thresholds_dim = (/ character(len=50) :: 'num_basis_functions_middle','n_singular_vectors_to_save','n_pseudoinverse_thresholds'/), &
uv_plasma_nsave_thresholds_dim = (/ character(len=50) :: 'nu_nv_plasma','n_singular_vectors_to_save','n_pseudoinverse_thresholds'/), &
uv_middle_nsave_thresholds_dim = (/ character(len=50) :: 'nu_nv_middle','n_singular_vectors_to_save','n_pseudoinverse_thresholds'/)
call cdf_open(ncid,outputFilename,'w',ierr)
IF (ierr .ne. 0) then
print *,"Error opening output file ",outputFilename
stop
end IF
! Scalars
call cdf_define(ncid, vn_nfp, nfp)
call cdf_define(ncid, vn_geometry_option_plasma, geometry_option_plasma)
call cdf_define(ncid, vn_geometry_option_middle, geometry_option_middle)
call cdf_define(ncid, vn_geometry_option_outer, geometry_option_outer)
call cdf_define(ncid, vn_a_plasma, a_plasma)
call cdf_define(ncid, vn_a_middle, a_middle)
call cdf_define(ncid, vn_a_outer, a_outer)
call cdf_define(ncid, vn_R0_plasma, R0_plasma)
call cdf_define(ncid, vn_R0_middle, R0_middle)
call cdf_define(ncid, vn_R0_outer, R0_outer)
call cdf_define(ncid, vn_nu_plasma, nu_plasma)
call cdf_define(ncid, vn_nv_plasma, nv_plasma)
call cdf_define(ncid, vn_nvl_plasma, nvl_plasma)
call cdf_define(ncid, vn_nu_middle, nu_middle)
call cdf_define(ncid, vn_nv_middle, nv_middle)
call cdf_define(ncid, vn_nvl_middle, nvl_middle)
call cdf_define(ncid, vn_nu_outer, nu_outer)
call cdf_define(ncid, vn_nv_outer, nv_outer)
call cdf_define(ncid, vn_nvl_outer, nvl_outer)
call cdf_define(ncid, vn_mpol_plasma, mpol_plasma)
call cdf_define(ncid, vn_ntor_plasma, ntor_plasma)
call cdf_define(ncid, vn_mnmax_plasma, mnmax_plasma)
call cdf_define(ncid, vn_num_basis_functions_plasma, num_basis_functions_plasma)
call cdf_define(ncid, vn_mpol_middle, mpol_middle)
call cdf_define(ncid, vn_ntor_middle, ntor_middle)
call cdf_define(ncid, vn_mnmax_middle, mnmax_middle)
call cdf_define(ncid, vn_num_basis_functions_middle, num_basis_functions_middle)
call cdf_define(ncid, vn_mpol_outer, mpol_outer)
call cdf_define(ncid, vn_ntor_outer, ntor_outer)
call cdf_define(ncid, vn_mnmax_outer, mnmax_outer)
call cdf_define(ncid, vn_num_basis_functions_outer, num_basis_functions_outer)
call cdf_define(ncid, vn_symmetry_option, symmetry_option)
call cdf_define(ncid, vn_n_singular_values_inductance_plasma_outer, n_singular_values_inductance_plasma_outer)
call cdf_define(ncid, vn_n_singular_values_inductance_middle_outer, n_singular_values_inductance_middle_outer)
call cdf_define(ncid, vn_n_singular_values_inductance_plasma_middle, n_singular_values_inductance_plasma_middle)
call cdf_define(ncid, vn_n_pseudoinverse_thresholds, n_pseudoinverse_thresholds)
call cdf_define(ncid, vn_n_singular_vectors_to_save, n_singular_vectors_to_save)
call cdf_define(ncid, vn_totalTime, totalTime)
call cdf_define(ncid, vn_basis_option_plasma, basis_option_plasma)
call cdf_define(ncid, vn_basis_option_middle, basis_option_middle)
call cdf_define(ncid, vn_basis_option_outer, basis_option_outer)
call cdf_define(ncid, vn_area_plasma, area_plasma)
call cdf_define(ncid, vn_area_middle, area_middle)
call cdf_define(ncid, vn_area_outer, area_outer)
call cdf_define(ncid, vn_check_orthogonality, check_orthogonality)
call cdf_define(ncid, vn_net_poloidal_current_Amperes, net_poloidal_current_Amperes)
call cdf_define(ncid, vn_curpol, curpol)
! Arrays with dimension 1
call cdf_define(ncid, vn_u_plasma, u_plasma, dimname=nu_plasma_dim)
call cdf_define(ncid, vn_v_plasma, v_plasma, dimname=nv_plasma_dim)
call cdf_define(ncid, vn_vl_plasma, vl_plasma, dimname=nvl_plasma_dim)
call cdf_define(ncid, vn_u_middle, u_middle, dimname=nu_middle_dim)
call cdf_define(ncid, vn_v_middle, v_middle, dimname=nv_middle_dim)
call cdf_define(ncid, vn_vl_middle, vl_middle, dimname=nvl_middle_dim)
call cdf_define(ncid, vn_u_outer, u_outer, dimname=nu_outer_dim)
call cdf_define(ncid, vn_v_outer, v_outer, dimname=nv_outer_dim)
call cdf_define(ncid, vn_vl_outer, vl_outer, dimname=nvl_outer_dim)
call cdf_define(ncid, vn_xm_plasma, xm_plasma, dimname=mnmax_plasma_dim)
call cdf_define(ncid, vn_xn_plasma, xn_plasma, dimname=mnmax_plasma_dim)
call cdf_define(ncid, vn_xm_middle, xm_middle, dimname=mnmax_middle_dim)
call cdf_define(ncid, vn_xn_middle, xn_middle, dimname=mnmax_middle_dim)
call cdf_define(ncid, vn_xm_outer, xm_outer, dimname=mnmax_outer_dim)
call cdf_define(ncid, vn_xn_outer, xn_outer, dimname=mnmax_outer_dim)
call cdf_define(ncid, vn_svd_s_inductance_plasma_outer, svd_s_inductance_plasma_outer, &
dimname=n_singular_values_inductance_plasma_outer_dim)
call cdf_define(ncid, vn_svd_s_inductance_middle_outer, svd_s_inductance_middle_outer, &
dimname=n_singular_values_inductance_middle_outer_dim)
call cdf_define(ncid, vn_svd_s_inductance_plasma_middle, svd_s_inductance_plasma_middle, &
dimname=n_singular_values_inductance_plasma_middle_dim)
call cdf_define(ncid, vn_pseudoinverse_thresholds, &
pseudoinverse_thresholds(1:n_pseudoinverse_thresholds), dimname=n_pseudoinverse_thresholds_dim)
call cdf_define(ncid, vn_n_singular_values_retained, n_singular_values_retained, dimname=n_pseudoinverse_thresholds_dim)
call cdf_define(ncid, vn_svd_u_inductance_plasma_middle_dominant_m, svd_u_inductance_plasma_middle_dominant_m, &
dimname=basis_plasma_dim)
call cdf_define(ncid, vn_svd_u_inductance_plasma_middle_dominant_n, svd_u_inductance_plasma_middle_dominant_n, &
dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_1_over_R_field, Bnormal_from_1_over_R_field, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_1_over_R_field_inductance, Bnormal_from_1_over_R_field_inductance, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_1_over_R_field_transfer, Bnormal_from_1_over_R_field_transfer, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_const_v_coils, Bnormal_from_const_v_coils, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_const_v_coils_inductance, Bnormal_from_const_v_coils_inductance, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_const_v_coils_transfer, Bnormal_from_const_v_coils_transfer, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_plasma_current, Bnormal_from_plasma_current, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_plasma_current_inductance, Bnormal_from_plasma_current_inductance, dimname=basis_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_plasma_current_transfer, Bnormal_from_plasma_current_transfer, dimname=basis_plasma_dim)
! Arrays with dimension 2
call cdf_define(ncid, vn_norm_normal_plasma, norm_normal_plasma, dimname=u_vl_plasma_dim)
call cdf_define(ncid, vn_norm_normal_middle, norm_normal_middle, dimname=u_vl_middle_dim)
call cdf_define(ncid, vn_norm_normal_outer, norm_normal_outer, dimname=u_vl_outer_dim)
if (save_level<2) then
call cdf_define(ncid, vn_inductance_plasma_outer, inductance_plasma_outer, dimname=basis_plasma_outer_dim)
call cdf_define(ncid, vn_inductance_middle_outer, inductance_middle_outer, dimname=basis_middle_outer_dim)
call cdf_define(ncid, vn_inductance_plasma_middle, inductance_plasma_middle, dimname=basis_plasma_middle_dim)
end if
call cdf_define(ncid, vn_svd_s_transferMatrix, svd_s_transferMatrix, dimname=n_singular_values_thresholds_dim)
if (save_level<1) then
call cdf_define(ncid, vn_basis_functions_plasma, basis_functions_plasma, dimname=uv_basis_plasma_dim)
call cdf_define(ncid, vn_basis_functions_middle, basis_functions_middle, dimname=uv_basis_middle_dim)
call cdf_define(ncid, vn_basis_functions_outer, basis_functions_outer, dimname=uv_basis_outer_dim)
end if
if (check_orthogonality) then
call cdf_define(ncid, vn_should_be_identity_plasma, should_be_identity_plasma, dimname=basis_basis_plasma_dim)
call cdf_define(ncid, vn_should_be_identity_middle, should_be_identity_middle, dimname=basis_basis_middle_dim)
call cdf_define(ncid, vn_should_be_identity_outer, should_be_identity_outer, dimname=basis_basis_outer_dim)
end if
call cdf_define(ncid, vn_svd_u_inductance_plasma_middle, svd_u_inductance_plasma_middle, dimname=basis_plasma_nsave_dim)
call cdf_define(ncid, vn_svd_v_inductance_plasma_middle, svd_v_inductance_plasma_middle, dimname=basis_middle_nsave_dim)
if (save_vectors_in_uv_format) then
call cdf_define(ncid, vn_svd_u_inductance_plasma_middle_uv, svd_u_inductance_plasma_middle_uv, dimname=uv_plasma_nsave_dim)
call cdf_define(ncid, vn_svd_v_inductance_plasma_middle_uv, svd_v_inductance_plasma_middle_uv, dimname=uv_middle_nsave_dim)
end if
call cdf_define(ncid, vn_svd_u_transferMatrix_dominant_m, svd_u_transferMatrix_dominant_m, &
dimname=basis_plasma_thresholds_dim)
call cdf_define(ncid, vn_svd_u_transferMatrix_dominant_n, svd_u_transferMatrix_dominant_n, &
dimname=basis_plasma_thresholds_dim)
if (transfer_matrix_option==2 .and. save_level<1) then
call cdf_define(ncid, vn_Merkel_Kmn, Merkel_Kmn, dimname=uv_middle_mnmax_outer_dim)
end if
call cdf_define(ncid, vn_overlap_plasma, overlap_plasma, dimname=basis_basis_plasma_dim)
call cdf_define(ncid, vn_overlap_middle, overlap_middle, dimname=basis_basis_middle_dim)
call cdf_define(ncid, vn_Bnormal_from_1_over_R_field_uv, Bnormal_from_1_over_R_field_uv, dimname=u_v_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_const_v_coils_uv, Bnormal_from_const_v_coils_uv, dimname=u_v_plasma_dim)
call cdf_define(ncid, vn_Bnormal_from_plasma_current_uv, Bnormal_from_plasma_current_uv, dimname=u_v_plasma_dim)
! Arrays with dimension 3
call cdf_define(ncid, vn_r_plasma, r_plasma, dimname=xyz_u_vl_plasma_dim)
call cdf_define(ncid, vn_r_middle, r_middle, dimname=xyz_u_vl_middle_dim)
call cdf_define(ncid, vn_r_outer, r_outer, dimname=xyz_u_vl_outer_dim)
if (save_level < 3) then
call cdf_define(ncid, vn_drdu_plasma, drdu_plasma, dimname=xyz_u_vl_plasma_dim)
call cdf_define(ncid, vn_drdu_middle, drdu_middle, dimname=xyz_u_vl_middle_dim)
call cdf_define(ncid, vn_drdu_outer, drdu_outer, dimname=xyz_u_vl_outer_dim)
call cdf_define(ncid, vn_drdv_plasma, drdv_plasma, dimname=xyz_u_vl_plasma_dim)
call cdf_define(ncid, vn_drdv_middle, drdv_middle, dimname=xyz_u_vl_middle_dim)
call cdf_define(ncid, vn_drdv_outer, drdv_outer, dimname=xyz_u_vl_outer_dim)
call cdf_define(ncid, vn_normal_plasma, normal_plasma, dimname=xyz_u_vl_plasma_dim)
call cdf_define(ncid, vn_normal_middle, normal_middle, dimname=xyz_u_vl_middle_dim)
call cdf_define(ncid, vn_normal_outer, normal_outer, dimname=xyz_u_vl_outer_dim)
if (transfer_matrix_option==2) then
call cdf_define(ncid, vn_d2rdu2_middle, d2rdu2_middle, dimname=xyz_u_vl_middle_dim)
call cdf_define(ncid, vn_d2rdudv_middle, d2rdudv_middle, dimname=xyz_u_vl_middle_dim)
call cdf_define(ncid, vn_d2rdv2_middle, d2rdv2_middle, dimname=xyz_u_vl_middle_dim)
end if
end if
call cdf_define(ncid, vn_svd_u_transferMatrix, svd_u_transferMatrix, dimname=basis_plasma_nsave_thresholds_dim)
call cdf_define(ncid, vn_svd_v_transferMatrix, svd_v_transferMatrix, dimname=basis_middle_nsave_thresholds_dim)
if (save_vectors_in_uv_format) then
call cdf_define(ncid, vn_svd_u_transferMatrix_uv, svd_u_transferMatrix_uv, dimname=uv_plasma_nsave_thresholds_dim)
call cdf_define(ncid, vn_svd_v_transferMatrix_uv, svd_v_transferMatrix_uv, dimname=uv_middle_nsave_thresholds_dim)
end if
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!1
! Done with cdf_define calls. Now write the data.
!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!1
! Scalars
call cdf_write(ncid, vn_nfp, nfp)
call cdf_write(ncid, vn_geometry_option_plasma, geometry_option_plasma)
call cdf_write(ncid, vn_geometry_option_middle, geometry_option_middle)
call cdf_write(ncid, vn_geometry_option_outer, geometry_option_outer)
call cdf_write(ncid, vn_a_plasma, a_plasma)
call cdf_write(ncid, vn_a_middle, a_middle)
call cdf_write(ncid, vn_a_outer, a_outer)
call cdf_write(ncid, vn_R0_plasma, R0_plasma)
call cdf_write(ncid, vn_R0_middle, R0_middle)
call cdf_write(ncid, vn_R0_outer, R0_outer)
call cdf_write(ncid, vn_nu_plasma, nu_plasma)
call cdf_write(ncid, vn_nv_plasma, nv_plasma)
call cdf_write(ncid, vn_nvl_plasma, nvl_plasma)
call cdf_write(ncid, vn_nu_middle, nu_middle)
call cdf_write(ncid, vn_nv_middle, nv_middle)
call cdf_write(ncid, vn_nvl_middle, nvl_middle)
call cdf_write(ncid, vn_nu_outer, nu_outer)
call cdf_write(ncid, vn_nv_outer, nv_outer)
call cdf_write(ncid, vn_nvl_outer, nvl_outer)
call cdf_write(ncid, vn_mpol_plasma, mpol_plasma)
call cdf_write(ncid, vn_ntor_plasma, ntor_plasma)
call cdf_write(ncid, vn_mnmax_plasma, mnmax_plasma)
call cdf_write(ncid, vn_num_basis_functions_plasma, num_basis_functions_plasma)
call cdf_write(ncid, vn_mpol_middle, mpol_middle)
call cdf_write(ncid, vn_ntor_middle, ntor_middle)
call cdf_write(ncid, vn_mnmax_middle, mnmax_middle)
call cdf_write(ncid, vn_num_basis_functions_middle, num_basis_functions_middle)
call cdf_write(ncid, vn_mpol_outer, mpol_outer)
call cdf_write(ncid, vn_ntor_outer, ntor_outer)
call cdf_write(ncid, vn_mnmax_outer, mnmax_outer)
call cdf_write(ncid, vn_num_basis_functions_outer, num_basis_functions_outer)
call cdf_write(ncid, vn_symmetry_option, symmetry_option)
call cdf_write(ncid, vn_n_singular_values_inductance_plasma_outer, n_singular_values_inductance_plasma_outer)
call cdf_write(ncid, vn_n_singular_values_inductance_middle_outer, n_singular_values_inductance_middle_outer)
call cdf_write(ncid, vn_n_singular_values_inductance_plasma_middle, n_singular_values_inductance_plasma_middle)
call cdf_write(ncid, vn_n_pseudoinverse_thresholds, n_pseudoinverse_thresholds)
call cdf_write(ncid, vn_n_singular_vectors_to_save, n_singular_vectors_to_save)
call cdf_write(ncid, vn_totalTime, totalTime)
call cdf_write(ncid, vn_basis_option_plasma, basis_option_plasma)
call cdf_write(ncid, vn_basis_option_middle, basis_option_middle)
call cdf_write(ncid, vn_basis_option_outer, basis_option_outer)
call cdf_write(ncid, vn_area_plasma, area_plasma)
call cdf_write(ncid, vn_area_middle, area_middle)
call cdf_write(ncid, vn_area_outer, area_outer)
call cdf_write(ncid, vn_check_orthogonality, check_orthogonality)
call cdf_write(ncid, vn_net_poloidal_current_Amperes, net_poloidal_current_Amperes)
call cdf_write(ncid, vn_curpol, curpol)
! Arrays with dimension 1
call cdf_write(ncid, vn_u_plasma, u_plasma)
call cdf_write(ncid, vn_v_plasma, v_plasma)
call cdf_write(ncid, vn_vl_plasma, vl_plasma)
call cdf_write(ncid, vn_u_middle, u_middle)
call cdf_write(ncid, vn_v_middle, v_middle)
call cdf_write(ncid, vn_vl_middle, vl_middle)
call cdf_write(ncid, vn_u_outer, u_outer)
call cdf_write(ncid, vn_v_outer, v_outer)
call cdf_write(ncid, vn_vl_outer, vl_outer)
call cdf_write(ncid, vn_xm_plasma, xm_plasma)
call cdf_write(ncid, vn_xn_plasma, xn_plasma)
call cdf_write(ncid, vn_xm_middle, xm_middle)
call cdf_write(ncid, vn_xn_middle, xn_middle)
call cdf_write(ncid, vn_xm_outer, xm_outer)
call cdf_write(ncid, vn_xn_outer, xn_outer)
call cdf_write(ncid, vn_svd_s_inductance_plasma_outer, svd_s_inductance_plasma_outer)
call cdf_write(ncid, vn_svd_s_inductance_middle_outer, svd_s_inductance_middle_outer)
call cdf_write(ncid, vn_svd_s_inductance_plasma_middle, svd_s_inductance_plasma_middle)
call cdf_write(ncid, vn_pseudoinverse_thresholds, &
pseudoinverse_thresholds(1:n_pseudoinverse_thresholds))
call cdf_write(ncid, vn_n_singular_values_retained, n_singular_values_retained)
call cdf_write(ncid, vn_svd_u_inductance_plasma_middle_dominant_m, svd_u_inductance_plasma_middle_dominant_m)
call cdf_write(ncid, vn_svd_u_inductance_plasma_middle_dominant_n, svd_u_inductance_plasma_middle_dominant_n)
call cdf_write(ncid, vn_Bnormal_from_1_over_R_field, Bnormal_from_1_over_R_field)
call cdf_write(ncid, vn_Bnormal_from_1_over_R_field_inductance, Bnormal_from_1_over_R_field_inductance)
call cdf_write(ncid, vn_Bnormal_from_1_over_R_field_transfer, Bnormal_from_1_over_R_field_transfer)
call cdf_write(ncid, vn_Bnormal_from_const_v_coils, Bnormal_from_const_v_coils)
call cdf_write(ncid, vn_Bnormal_from_const_v_coils_inductance, Bnormal_from_const_v_coils_inductance)
call cdf_write(ncid, vn_Bnormal_from_const_v_coils_transfer, Bnormal_from_const_v_coils_transfer)
call cdf_write(ncid, vn_Bnormal_from_plasma_current, Bnormal_from_plasma_current)
call cdf_write(ncid, vn_Bnormal_from_plasma_current_inductance, Bnormal_from_plasma_current_inductance)
call cdf_write(ncid, vn_Bnormal_from_plasma_current_transfer, Bnormal_from_plasma_current_transfer)
! Arrays with dimension 2
call cdf_write(ncid, vn_norm_normal_plasma, norm_normal_plasma)
call cdf_write(ncid, vn_norm_normal_middle, norm_normal_middle)
call cdf_write(ncid, vn_norm_normal_outer, norm_normal_outer)
if (save_level<2) then
call cdf_write(ncid, vn_inductance_plasma_outer, inductance_plasma_outer)
call cdf_write(ncid, vn_inductance_middle_outer, inductance_middle_outer)
call cdf_write(ncid, vn_inductance_plasma_middle, inductance_plasma_middle)
end if
call cdf_write(ncid, vn_svd_s_transferMatrix, svd_s_transferMatrix)
if (save_level<1) then
call cdf_write(ncid, vn_basis_functions_plasma, basis_functions_plasma)
call cdf_write(ncid, vn_basis_functions_middle, basis_functions_middle)
call cdf_write(ncid, vn_basis_functions_outer, basis_functions_outer)
end if
if (check_orthogonality) then
call cdf_write(ncid, vn_should_be_identity_plasma, should_be_identity_plasma)
call cdf_write(ncid, vn_should_be_identity_middle, should_be_identity_middle)
call cdf_write(ncid, vn_should_be_identity_outer, should_be_identity_outer)
end if
call cdf_write(ncid, vn_svd_u_inductance_plasma_middle, svd_u_inductance_plasma_middle)
call cdf_write(ncid, vn_svd_v_inductance_plasma_middle, svd_v_inductance_plasma_middle)
if (save_vectors_in_uv_format) then
call cdf_write(ncid, vn_svd_u_inductance_plasma_middle_uv, svd_u_inductance_plasma_middle_uv)
call cdf_write(ncid, vn_svd_v_inductance_plasma_middle_uv, svd_v_inductance_plasma_middle_uv)
end if
call cdf_write(ncid, vn_svd_u_transferMatrix_dominant_m, svd_u_transferMatrix_dominant_m)
call cdf_write(ncid, vn_svd_u_transferMatrix_dominant_n, svd_u_transferMatrix_dominant_n)
if (transfer_matrix_option==2 .and. save_level<1) then
call cdf_write(ncid, vn_Merkel_Kmn, Merkel_Kmn)
end if
call cdf_write(ncid, vn_overlap_plasma, overlap_plasma)
call cdf_write(ncid, vn_overlap_middle, overlap_middle)
call cdf_write(ncid, vn_Bnormal_from_1_over_R_field_uv, Bnormal_from_1_over_R_field_uv)
call cdf_write(ncid, vn_Bnormal_from_const_v_coils_uv, Bnormal_from_const_v_coils_uv)
call cdf_write(ncid, vn_Bnormal_from_plasma_current_uv, Bnormal_from_plasma_current_uv)
! Arrays with dimension 3
call cdf_write(ncid, vn_r_plasma, r_plasma)
call cdf_write(ncid, vn_r_middle, r_middle)
call cdf_write(ncid, vn_r_outer, r_outer)
if (save_level < 3) then
call cdf_write(ncid, vn_drdu_plasma, drdu_plasma)
call cdf_write(ncid, vn_drdu_middle, drdu_middle)
call cdf_write(ncid, vn_drdu_outer, drdu_outer)
call cdf_write(ncid, vn_drdv_plasma, drdv_plasma)
call cdf_write(ncid, vn_drdv_middle, drdv_middle)
call cdf_write(ncid, vn_drdv_outer, drdv_outer)
call cdf_write(ncid, vn_normal_plasma, normal_plasma)
call cdf_write(ncid, vn_normal_middle, normal_middle)
call cdf_write(ncid, vn_normal_outer, normal_outer)
if (transfer_matrix_option==2) then
call cdf_write(ncid, vn_d2rdu2_middle, d2rdu2_middle)
call cdf_write(ncid, vn_d2rdudv_middle, d2rdudv_middle)
call cdf_write(ncid, vn_d2rdv2_middle, d2rdv2_middle)
end if
end if
call cdf_write(ncid, vn_svd_u_transferMatrix, svd_u_transferMatrix)
call cdf_write(ncid, vn_svd_v_transferMatrix, svd_v_transferMatrix)
if (save_vectors_in_uv_format) then
call cdf_write(ncid, vn_svd_u_transferMatrix_uv, svd_u_transferMatrix_uv)
call cdf_write(ncid, vn_svd_v_transferMatrix_uv, svd_v_transferMatrix_uv)
end if
! Finish up:
call cdf_close(ncid)
end subroutine write_output