config_cluster_lsf.json

{
    # default settings for job on LSF cluster
    "__default__" :
    {
        "group"     : "/tlrdl/fusion", # user should change this
        #"queue"     : "research-rh7", # optional: specify queue to submit to
        "memory"    : 15, # all jobs default to 15 in Gb
        #"resources" : "\"select[mem>15000] rusage[mem=15000] span[hosts=1]\"",
        "name"      : "snkmk.{rule}.{wildcards}",
        "output"    : "logs/cluster/{rule}/snkmk.{wildcards}.o",
        "error"     : "logs/cluster/{rule}/snkmk.{wildcards}.e"
    },
    
    # settings for rules in QTLtools module
    "vqtlmapper__top_snp" :
    {
        "memory"    : 40  # vqtlmapper__top_snp uses 40 Gb
    }
}