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environment.yml
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channels:
- conda-forge
- bioconda
- r
- defaults
dependencies:
- bcftools=1.7=0
- bedtools=2.27.1=1
- bioconductor-qvalue=2.10.0=r3.4.1_0
- filechunkio=1.6=py35_0
- ftputil=3.2=py35_0
- gawk=4.1.3=1
- htslib=1.7=0
- plink2=1.90b3.35=0
- pyasn1-modules=0.0.5=py35_0
- pysftp=0.2.9=py35_0
- r-data.table=1.10.4=r3.4.1_0
- r-peer=1.3=r3.4.1_0
- rsa=3.1.4=py35_0
- samtools=1.7=2
- snakemake=4.7.0=py35_0
- tabix=0.2.5=1
- urllib3=1.12=py35_0
- vcftools=0.1.15=1
- aioeasywebdav=2.2.0=py35_0
- aiohttp=3.0.6=py35_0
- appdirs=1.4.3=py_0
- asn1crypto=0.24.0=py35_0
- async-timeout=2.0.0=py35_0
- attrs=17.4.0=py_0
- blas=1.1=openblas
- boto3=1.6.3=py_0
- botocore=1.9.4=py_0
- bzip2=1.0.6=1
- ca-certificates=2018.1.18=0
- cachetools=2.0.1=py_0
- cairo=1.14.6=4
- certifi=2018.1.18=py35_0
- cffi=1.11.5=py35_0
- chardet=3.0.4=py35_0
- configargparse=0.12.0=py35_0
- cryptography=2.1.4=py35_0
- curl=7.54.1=0
- docutils=0.14=py35_0
- dropbox=7.3.1=py35_0
- fontconfig=2.12.1=4
- freetype=2.7=1
- gettext=0.19.8.1=0
- glib=2.51.4=0
- gmp=6.1.2=0
- google-auth=1.2.1=py_0
- google-auth-httplib2=0.0.2=py35_0
- google-cloud-core=0.24.1=py35_0
- google-cloud-storage=1.1.1=py35_0
- google-resumable-media=0.0.2=py35_0
- googleapis-common-protos=1.5.3=py35_0
- graphite2=1.3.11=0
- gsl=2.2.1=blas_openblas_4
- harfbuzz=1.4.3=0
- hdf5=1.10.1=2
- httplib2=0.10.3=py35_0
- icu=58.2=0
- idna=2.6=py35_1
- idna_ssl=1.0.0=0
- jmespath=0.9.3=py35_0
- jpeg=9b=2
- krb5=1.14.2=0
- libffi=3.2.1=3
- libiconv=1.15=0
- libpng=1.6.34=0
- libprotobuf=3.5.1.1=0
- libssh2=1.8.0=1
- libtiff=4.0.9=0
- libxml2=2.9.5=0
- mpfr=3.1.5=0
- multidict=4.1.0=py35_0
- ncurses=5.9=10
- numpy=1.14.1=py35_blas_openblas_200
- openblas=0.2.20=7
- openssl=1.0.2n=0
- pandas=0.22.0=py35_0
- pango=1.40.4=0
- paramiko=2.4.0=py35_0
- pcre=8.39=0
- pip=9.0.1=py35_1
- pixman=0.34.0=1
- prettytable=0.7.2=py35_1
- protobuf=3.5.1.1=py35_0
- psutil=5.4.3=py35_0
- pyasn1=0.4.2=py_0
- pycparser=2.18=py35_0
- pynacl=1.1.2=py35_0
- python=3.5.5=0
- python-dateutil=2.6.1=py35_0
- python-irodsclient=0.7.0=py_0
- pytz=2018.3=py_0
- pyyaml=3.12=py35_1
- r-assertthat=0.1=r3.4.1_0
- r-base=3.4.1=3
- r-cli=1.0.0=r3.4.1_0
- r-colorspace=1.3_2=r3.4.1_0
- r-crayon=1.3.4=r3.4.1_0
- r-dichromat=2.0_0=r3.4.1_0
- r-digest=0.6.12=r3.4.1_0
- r-getopt=1.20.0=r3.4.1_0
- r-ggplot2=2.2.1=r3.4.1_0
- r-glue=1.1.1=r3.4.1_0
- r-gtable=0.2.0=r3.4.1_0
- r-labeling=0.3=r3.4.1_0
- r-lazyeval=0.2.0=r3.4.1_0
- r-magrittr=1.5=r3.4.1_0
- r-mass=7.3_48=r3.4.1_0
- r-munsell=0.4.3=r3.4.1_0
- r-optparse=1.4.4=r3.4.1_0
- r-pillar=1.1.0=r3.4.1_0
- r-plyr=1.8.4=r3.4.1_0
- r-r6=2.2.0=r3.4.1_0
- r-rcolorbrewer=1.1_2=r3.4.1_0
- r-rcpp=0.12.13=r3.4.1_0
- r-reshape2=1.4.3=r3.4.1_0
- r-rlang=0.1.6=r3.4.1_0
- r-scales=0.5.0=r3.4.1_0
- r-stringi=1.1.6=r3.4.1_0
- r-stringr=1.3.0=r3.4.1_0
- r-tibble=1.4.2=r3.4.1_0
- r-utf8=1.1.3=r3.4.1_0
- r-viridislite=0.2.0=r3.4.1_0
- ratelimiter=1.2.0=py35_0
- readline=7.0=0
- requests=2.13.0=py35_0
- s3transfer=0.1.13=py35_0
- scipy=1.0.0=py35_blas_openblas_201
- setuptools=38.5.2=py35_0
- six=1.11.0=py35_1
- sqlite=3.20.1=2
- tk=8.6.7=0
- wheel=0.30.0=py35_2
- wrapt=1.10.11=py35_0
- xmlrunner=1.7.7=py_0
- xz=5.2.3=0
- yaml=0.1.7=0
- yarl=1.1.1=py35_0
- zlib=1.2.11=0
- bcrypt=3.1.4=py35ha35c455_0
- datrie=0.7.1=py35_0
- libgcc=7.2.0=h69d50b8_2
- libgcc-ng=7.2.0=h7cc24e2_2
- libgfortran=3.0.0=1
- libstdcxx-ng=7.2.0=h7a57d05_2