From a615558170ec25b8acda2b2a1afc0da5e58ff43d Mon Sep 17 00:00:00 2001 From: Yiming Yang Date: Mon, 17 Feb 2025 02:53:46 -0800 Subject: [PATCH] fix bug --- workflows/cellranger/cellranger_count.wdl | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflows/cellranger/cellranger_count.wdl b/workflows/cellranger/cellranger_count.wdl index 2e553a1b..ade3d276 100644 --- a/workflows/cellranger/cellranger_count.wdl +++ b/workflows/cellranger/cellranger_count.wdl @@ -172,7 +172,7 @@ task run_cellranger_count { except CalledProcessError: # Localize tar file tar_file = sample_name + ".tar" - call_args = ['strato', 'cp', '-m', directory + '/' + tar_file, target] + call_args = ['strato', 'cp', '-m', directory + '/' + tar_file, '.'] print(' '.join(call_args)) check_call(call_args)