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barcoding information #125

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thomasmanke opened this issue Nov 8, 2023 · 0 comments
Open

barcoding information #125

thomasmanke opened this issue Nov 8, 2023 · 0 comments

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@thomasmanke
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information of barcoding is obtained from diverse source json*report, SampleSheet
and passed through a series of confusing and convoluted entires in config[]. This should be tidied up.

Proposal: there should be at most two entries:

  • config['info_dict']['barcoding'] = True/False
  • config['info_dict']['barcoding_kit']= None/"kit_name"
    possibly one entry could be sufficient

(A solution will likely require a different way to pass config[] between functions)

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