From efa7f1458971ac3f0da56d0f5fb55d48d7a79c2e Mon Sep 17 00:00:00 2001 From: Kyle McChesney Date: Thu, 28 Mar 2024 14:05:40 -0600 Subject: [PATCH] update README.md with install info for hgvs/postgres --- README.md | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/README.md b/README.md index 655efc8..9198253 100644 --- a/README.md +++ b/README.md @@ -11,7 +11,9 @@ Documentation for the project can be found [here](https://mammothbio-os-palamede ## Installing -Palamedes is packaged in PyPI, to install simply run: `pip install palamedes` +Palamedes uses the [hgvs](https://github.com/biocommons/hgvs) package as a dependency. At this time, `hgvs` requires `postgresql` system dependencies to be installed before use. Please see the [README](https://github.com/biocommons/hgvs/blob/main/README.md#installing-hgvs-locally) for install instructions if needed. + +Palamedes itself is packaged in PyPI, to install simply run: `pip install palamedes` ## Usage - CLI